Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00119 ATGGTGAATGCGTTGGTTGAACGCGCTACGAGCGACATGCTCATCGGTCCTGATTGGGCGTTGAATATCGAGATCTGTGATGTACTCAATCGTGAACCAGGGCAATCAAAGGATGTTGTTAAAGGTTTAAAGAGGCGGATTGGAAGTAGAAATTCTAAAGTTCAACTTCTTGCACTAACTCTGCTGGAGACGATCATAAAAAATTGTGGGGACATTGTCCACATGCATGTTGCAGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCGGATGCCCATGTTAGAGAGAAGATATTGACTCTTATTGATACTTGGCAAGAGGCTTTTGGAGGCCCAAGGGCAAGATATACACAGTATTATGCTGCCTACCAGGAACTGTTGCATGCGGGGGCTGTATTCCCTCCAAGGTCTGAGCAATCTGCACCCATATTCACGCCACTACAATCACAACCATTGGGATCATACCCTCAAAACATACGTGACTCTGATACTCGGCAACACACAGCTGAGTCCTCAGCGGAGTCTGAGTTTCCGACTCTTAGTTTGACCGAAATTCAGAATGCACGTGGTATTATGGACGTTCTTACAGAAATGCTCAGTGCTATAGAGCCTGGTAACAAAGAAGGGCTTCGGCAGGAAGTTATTGTTGATTTGGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTCGTTAATTCAACTTCGGATGAGTCACTACTATGCCAAGGACTAGCTCTTAATGATGAACTGCAGCGTATACTTGCCAAGCATGAATCCATAGCTTCAGGACCTACTGTCAAAAATCAAACAGAGAAATCAAATTCCGCACCTACTGGAGCACGTGTAGATGCTGATGGTCCTTTGATTGATACTGGAGATACTGGTATACAAACTGATGCAAGATCTTCTAGTGCTGAAGCAGGGTCTCAAACATTGAATCAGTTGATGCTTCCTGCACCCTCTACATCAAATGGTTCAGCTCCTCCTCCAGTAAAGGTTGATCCCAAATGGGATCTGCTCAGTGGTGAAGAATTTAACTCACCAAAAGCAGATAATTCACTTGCTCTTGTTCCTGTAGGAGAACAACAGGCAGCCAGTCCTACGTCTCAACAAAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAACAATGTGCCACTTTCTGTTAATACCCAGCCAACGACCCCTCAATTTCAACAGCAAACTATCATATCTCAAGGTGTATTTTACCCCAACGGAGGTATGCCAAATGGAGGGTCACCTCGGTACGAGCAATCACTATATACTCAAAGTACAGGTCCCGCCTGGAATGGTCAAGTTGTGCAGCAGCAGCAGCAGCAGGCTCCTTCACCCGTTTATGGTGCACAAAGTGGTGGATCATTCCCACCTCCTCCTTGGGAAACTCAGCCCGCAGACAACGGTAGTCCAGTAGCAGGCAGTCAATACCCGCAGCCAATGCAAGTCACTCAAATGGTCATGACACATGTACAAACTGGCGGACTTCCTCAGGGACCTCAAGCAACGGGATATGATCAGGCTTCTGGAATGTATATACAGCCAAATGCTAACCATATCACTCCATTCAATAACCAGGTTCAAAATAACCCAATGGGATTGCAGCCTCAGTATATTCCGGGGGTTGCAGGTCCTCCTTATATGGGCATGGTTCCACCTCAAATGCAAAATGGTCCAGTGGCTTCCATGTATCCTCAACAGATGTATGGTAACCAATTCAATGGATATGGATATGGTCAGCAACAAGGGCTTCAATATGCTGAGCAGCAAATGTATGGTTTATCTTTGAAGGATGATAATGCTCTAAGAAATCCTTACCAGGTTTCTGCTGCATCTTATGCGCCATCCGGAAAACCTTCCAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAACCAAAACCTACTACAGGCCCAAGCTGA 1974 0.4519 MVNALVERATSDMLIGPDWALNIEICDVLNREPGQSKDVVKGLKRRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDAHVREKILTLIDTWQEAFGGPRARYTQYYAAYQELLHAGAVFPPRSEQSAPIFTPLQSQPLGSYPQNIRDSDTRQHTAESSAESEFPTLSLTEIQNARGIMDVLTEMLSAIEPGNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDELQRILAKHESIASGPTVKNQTEKSNSAPTGARVDADGPLIDTGDTGIQTDARSSSAEAGSQTLNQLMLPAPSTSNGSAPPPVKVDPKWDLLSGEEFNSPKADNSLALVPVGEQQAASPTSQQNALVLFDMFSNGNNVPLSVNTQPTTPQFQQQTIISQGVFYPNGGMPNGGSPRYEQSLYTQSTGPAWNGQVVQQQQQQAPSPVYGAQSGGSFPPPPWETQPADNGSPVAGSQYPQPMQVTQMVMTHVQTGGLPQGPQATGYDQASGMYIQPNANHITPFNNQVQNNPMGLQPQYIPGVAGPPYMGMVPPQMQNGPVASMYPQQMYGNQFNGYGYGQQQGLQYAEQQMYGLSLKDDNALRNPYQVSAASYAPSGKPSKPEDKLFGDLVDMAKVKPKPTTGPS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00119 657 MobiDBLite consensus disorder prediction 268 283 - -
Vivi3g00119 657 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Vivi3g00119 657 CDD GAT_GGA-like_plant 188 266 - -
Vivi3g00119 657 Gene3D - 183 275 IPR038425 -
Vivi3g00119 657 MobiDBLite consensus disorder prediction 619 657 - -
Vivi3g00119 657 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Vivi3g00119 657 SUPERFAMILY GAT-like domain 142 269 - -
Vivi3g00119 657 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Vivi3g00119 657 PANTHER TOM1-LIKE PROTEIN 1 652 IPR044836 GO:0035091|GO:0043130|GO:0043328
Vivi3g00119 657 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Vivi3g00119 657 FunFam TOM1-like protein 2 182 271 - -
Vivi3g00119 657 FunFam TOM1-like protein 2 1 148 - -
Vivi3g00119 657 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Vivi3g00119 657 CDD VHS 2 130 - -
Vivi3g00119 657 MobiDBLite consensus disorder prediction 449 485 - -
Vivi3g00119 657 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Vivi3g00119 657 Gene3D - 1 148 IPR008942 -
Vivi3g00119 657 MobiDBLite consensus disorder prediction 268 314 - -
Vivi3g00119 657 MobiDBLite consensus disorder prediction 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00119 Vivi-Chr3 2037065 2044836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00119 - - vvo:131660026 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00119 3 2037065 2044836 Vivi3g00119 3 2037065 2044836 ECH