Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00107 ATGGTTGATATGAAGATGAGATCCATATTATGGGTATTATTGTTGTTGTTTGGTTGTTTTGGGATTGTTTACGGTGAAAGAAAGTTTGTGAAAATTCAAGTACCAAGTTTTAATGTTACTTCTACGATGATTCAAGAACATAGTTTTCTCAGAAAAGCTGTTAATTTCTTATGGAAATCAGATGGATCGGGTTATACACACGTGTGGCCGGAAATGGAATTTGGGTGGCAAATTGTGTTAGGTTCTTTTATTGGATTTTGTGGGGCTGCGTTTGGAAGTGTTGGTGGAGTTGGTGGTGGAGGCATATTTGTTCCTATGCTTAGTCTTATTATTGGTTTTGATCCTAAAACATCTACGGCTATTTCTAAATGTATGATCATGGGTGCAGCTCTGTCAACTGTTTACTACAACCTTAGGCTAAGACATCCAACCTTAAACATGCCAATAATTGACTATGATTTGGCACTTCTGATTCAACCTATGCTCATGCTTGGTATCAGTATTGGAGTGGTCTTCAATGTTGTATTTCCTGATTGGATGGTCACTATATTGCTTATTATTCTTTTCTTAGGAACATCAACAAAAGCATTCTTTAAAGGGATGGAGACATGGAATAAGGAAACCATAATGAAAAAGGAGGCTGCTAGGAGACAAGAATCAGTTGGTTCAGGAGAATACAAAGCTCTTCCAACTGGACCAGATGCTGCCACTGAAAAGGAAGACACCAAGGTGTCTATGTTTGAAAATGTTTACTGGAGGGAGTTTGGGCTACTAATGTTTGTTTGGGTTTCATTCCTTGCATTACAGATTGTTAAGCAAAAATACACAACTACATGTTCGACAGCATATTGGGTACTGAACTTGTTGCAGATTCCAATCTCCGTTGGGGTAACTGCGTACGAGGCAACTATGTTGTTCACTGGAAGAAGAGTAATAGCTTCTGTTGGTGATCAAGGGAAAGAATTTACCGTTTTCCAGCTAGCGATCTATTGTGTCTTCGGCATATTGGCCGGTATAGTCGGTGGAATGCTGGGACTAGGAGGCGGATTCATTATGGGTCCACTTTTTCTCGAGCTCGGTGTTCCTCCTCAAGTATCAAGCGCAACGGCCACGTTTGCAATGACATTCTCCTCGTCTATGTCTGTCGTGGAATACTACTTGCTGAAAAGATTTCCAGTTCCTTATGCTCTTTACTTAAGCCTGGTGGCTACTGTTGCAGCCTTGGTTGGACAACATATTGTGAGAAGACTTATTATATTGTTTGGAAGAGCTTCTCTTATCATCTTTATTCTAGCCGGCACAATATTTATCAGCGCAGTCTCACTAGGTGGAGTTGGCATTTCAAATATGGTGCACAAGATTGCAATGCATGAATATATGGGATTTGAGAACATATGCAAATATGGGTCATAG 1413 0.4006 MVDMKMRSILWVLLLLFGCFGIVYGERKFVKIQVPSFNVTSTMIQEHSFLRKAVNFLWKSDGSGYTHVWPEMEFGWQIVLGSFIGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDPKTSTAISKCMIMGAALSTVYYNLRLRHPTLNMPIIDYDLALLIQPMLMLGISIGVVFNVVFPDWMVTILLIILFLGTSTKAFFKGMETWNKETIMKKEAARRQESVGSGEYKALPTGPDAATEKEDTKVSMFENVYWREFGLLMFVWVSFLALQIVKQKYTTTCSTAYWVLNLLQIPISVGVTAYEATMLFTGRRVIASVGDQGKEFTVFQLAIYCVFGILAGIVGGMLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLSLVATVAALVGQHIVRRLIILFGRASLIIFILAGTIFISAVSLGGVGISNMVHKIAMHEYMGFENICKYGS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00107 470 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vivi3g00107 470 PANTHER CEREBLON 54 466 - -
Vivi3g00107 470 Pfam Sulfite exporter TauE/SafE 83 202 IPR002781 GO:0016020
Vivi3g00107 470 Pfam Sulfite exporter TauE/SafE 332 433 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00107 Vivi-Chr3 1854853 1858911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00107 - - gmx:100809318 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00107 3 1854853 1858911 Vivi3g00107 3 1854853 1858911 ECH
Vivi4g04773 4 176995582 176998368 Vivi3g00107 3 1854853 1858911 PCT