Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00056 ATGGACTATTGTGTAAGAGAATTAGAAGGAAAACAAGCTCATGATCCTTTATTCATGAAGAAAAATTCATCGACATCGTCCTCGACCGATCCTCATCGTCGCGTGTTTGTTCATGGACCTGTGATTGTAGGAGCAGGACCATCAGGCTTAGCAGCAGCAGCATGTCTCAAACAAAAAAACATTCCATCCATAATTCTCGAAAGATCCAACTGCATAGCTTCATTATGGCAACTCAAAACCTACGACCGACTTCGTCTCCACCTCCCGAAACAATTCTGCGAGTTACCCTTCATGGAGTTTCCTTCAAACTTCCCAACCTACCCTTCAAAACAACAGTTCATAAAATACCTGGAGAATTACGCAGAGAGGTTCCATATTAGTCCAAAATTCAATGAGACAGTTCAAAAGGCCGAATTCGATAGTAAAACTGGTTGTTGGAAGGTGAAGAGTCTTAATAGTAAAGGCGATGTTACGACGGAGTATGTTTGTCGGTGGTTGATCGTTGCGACCGGAGAGAATGCCGAGGCTGTTGTGCCTAGTATTGAAGGTGCAGATGAATTTGAAGGAGTTATAAGACATACTAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAGAGTTTTGGTTGTTGGTTGTGGAAATTCTGGTATGGAAGTTTGTTTGGATCTTTGTAACCATGATGCTACTCCTTCTCTTGTTGTTAGAGATTCAGTACACGTTCTACCACGAGAGATGCTAGGGAAATCAACTTTTGGGTTGTCCATGTGGTTACTAAAGTGGTTTCCATTGAGACTTGTCGATAGGTTCTTGCTCTTAGTGTCATGGCTTTTGCTTGGTGACACTTCTCAACTTGGTTTGGATCGTCCTAGTTTGGGTCCCCTTCAACTCAAAAACCTCACGGGAAAAACTCCTGTCTTGGATGTGGGTACCCTTGCCAAGATTAAAGCTGGACACATTAAGGTAAGGCCAAGCATAAAGAAGTTAAAACGTCATACAGTGGAATTTGTAGATGGAAGATCAGAAAATTTTGATGGCATCATTTTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTCAAGGAAGAGGATATGTTTTCTATGAAAGATGGATTTCCTATGAAGCCATTTCCAAATGGGTGGAAAGGTAAAAATGGACTGTATGCAGTAGGTTTTACCAAGAGAGGACTATTAGGTGCATCAATGGATGCAAAAAGAATAGCTGATGACATTGAACAATGTTTAAAAGCTAAGGCAAAACATGGATCATAA 1275 0.4102 MDYCVRELEGKQAHDPLFMKKNSSTSSSTDPHRRVFVHGPVIVGAGPSGLAAAACLKQKNIPSIILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMEFPSNFPTYPSKQQFIKYLENYAERFHISPKFNETVQKAEFDSKTGCWKVKSLNSKGDVTTEYVCRWLIVATGENAEAVVPSIEGADEFEGVIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHDATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWFPLRLVDRFLLLVSWLLLGDTSQLGLDRPSLGPLQLKNLTGKTPVLDVGTLAKIKAGHIKVRPSIKKLKRHTVEFVDGRSENFDGIILATGYKSNVPYWLKEEDMFSMKDGFPMKPFPNGWKGKNGLYAVGFTKRGLLGASMDAKRIADDIEQCLKAKAKHGS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00056 424 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 41 420 - -
Vivi3g00056 424 SUPERFAMILY FAD/NAD(P)-binding domain 41 245 IPR036188 -
Vivi3g00056 424 SUPERFAMILY FAD/NAD(P)-binding domain 204 417 IPR036188 -
Vivi3g00056 424 Pfam Flavin-binding monooxygenase-like 42 360 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vivi3g00056 424 FunFam Flavin-containing monooxygenase 40 421 - -
Vivi3g00056 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Vivi3g00056 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 207 225 - -
Vivi3g00056 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Vivi3g00056 424 Gene3D - 38 423 IPR036188 -
Vivi3g00056 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 203 227 - -
Vivi3g00056 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00056 Vivi-Chr3 804265 810103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00056 K11816 - gmx:100799546 723.776