Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00051 ATGGGTTGTGCACAGTCCAGAATAGACAATGAAGAATCAGTTGCTAGATGTAAAGAGCGGAAGAATTTGATGAGAGAAGCCGTTGTTGCTCGTAACGCCTTCGCCGCCGGTCATTCCGGTTACGCCATGGCTCTTAAAAACACCGGCGCCGCTCTTTCGGATTACTCTCACGGCGAAACGCATTTGGATGATATTGAACTTCACCCGCCGCCGATGAATACTTCCTCTAACGCACAGCCGCCGCCTCCACCGCCGCCGCCTCCGCCGCACATGGAGGAGAATCTCCCTCCTCCACCGCCTCTTCCGCCTAATTTCTCACCTGCGTCGCTCAAACGCGCTGTCACGTTGCCGCCTGTGGCTTTGCAGCATAGAAAACCTAGCGGTGGTGTCTCCATTGTCGAAGAGATGGAGAAAAACGCGAAAATCGAGGTTGAGGGAGAGAGAGGGAAAGACGGTGACGGTGATGGATTGGTTCACGCGCCGCCTTCTCCGCCTGGAGGTAAAGCGATGCCGCCGCCGCCTCTGCCGGAGTCGAAAAACATGGCGTGGGATTATTTCTTCATGGATATGAACATGGCGAGAGCTTCTTTGAATGAGGAAGATGAGATTGAGAATGAAGAAGGTGAAATTGAAATTGAAGATGAGAATGTTGATGATAACAAAGGACATGTGGAGGATGAGATTGAACCGAAGACGCCGGAGAAAGCGGAGGTTGATGTGTATAGTAAAGAACATGAGCATGTTCATGATCATGAGGATGATGTGATAAGAGAGGCCAAACACATTGAACATTCTAAAACTGCTCCTGCTGAGTTTAGAAGAGCAATTAAGTTGGTTCCCACTGTTTCTCTCATGCAGATTCTTGGTTCCCTTGATGATCATTTTCTTAAAGCTTCTGAAACTGCTCAAGAAGTTTCCAAGATGCTTGAAGCTACTAGGTTGCATTATCATTCTAATTTCGCCGATAATCGGGGTCACATTGATCATTCGGCTAGAGTCATGAAAGTGATAACATGGAATAGGTCCTTCAAGGGTGTGTCGAACGGGGAGGGTGCTAAAGATGATTTTGATTCGGAAGAGTATGAAACACATGCCACTGTTTTGGACAAGTTGTTAGCTTGGGAAAAGAAACTCTATGAAGAGGTCAAGCAAGGTGAGCTTATGAAGTTTGAATATCAAAGAAAAGTTTCAGTTTTGAACAAGCAGAAGAAGCGTGGCGCCAGTGTTGATTCTTTAGGGAAAACTAAAGCGGCCGTAAGTCATTTACACACAAGATATATTGTTGATATGCAGTCGATGGATTCAACAGTTTCAGAAGTGAACCATATTCGCGATGCTCAGCTGTATCCCAAACTTGTTGCTCTTGTTATTGAGATGGCCAATATGTGGGAGAGTATGTTCATGCATCATGACAGTCAGCTGAAAATAGTAACCGACCTCAAATCTCTTGATATTTCTCAAGATCAGAAGGAAACAACCAAACATCATTATGACCGAACCATACAGCTTTGGAATGTAATCCAAGAATGGCAGTCACAATTTGAGAAGCTCGTGACTCAACAGAAACATTACATTCAAGCTCTTAATAACTGGCTCAAGTTAAATCTTATTCCCATCGAAAGCAACTTAAAAGAGAAAGTCTCGTCCCCGCCAAGAGCACATAATCCACCAATTCAAACCCTTCTCCATGCATGGCACGATTACCTTGACAAGCTTCCCGATGAACTAGCGAAATCTGCCATTTCCTCGTTTGCTGCTGTGATAAAGACAATCATACTTCAGCAGGAGGAAGAGATGAAGTTGAAGGAGAAATGTGAGGAAATTCAAAAGGAATTCATGAAGAAAAACCAAGCTTTTCAGGATTGGTACCAAAAGCATTTACAAAAAATGGGGCCAGAAGAAGCAGATAGAGGAGAGGAAGGAAATACGAACAATCCCGTCTCGGAGAAACAGTTTGTCGTTGAGAGCTTGAAAAAGAGATTAGAAGAAGAATCTGAATCTCACAAAAAATTGTGTGTTCAAGTAAGAGAAAAGTCACTCCAGAGTCTCAAAACTCGCCTGCCTGAGCTCTTCCGCGCGCTATCGGACTATACGCATGCATGTTCTGATGCTTATAACAGGCTGAAGTCAATTGCACAATCTCAAGGCGGCAATGCAGCTTGA 2163 0.4471 MGCAQSRIDNEESVARCKERKNLMREAVVARNAFAAGHSGYAMALKNTGAALSDYSHGETHLDDIELHPPPMNTSSNAQPPPPPPPPPPHMEENLPPPPPLPPNFSPASLKRAVTLPPVALQHRKPSGGVSIVEEMEKNAKIEVEGERGKDGDGDGLVHAPPSPPGGKAMPPPPLPESKNMAWDYFFMDMNMARASLNEEDEIENEEGEIEIEDENVDDNKGHVEDEIEPKTPEKAEVDVYSKEHEHVHDHEDDVIREAKHIEHSKTAPAEFRRAIKLVPTVSLMQILGSLDDHFLKASETAQEVSKMLEATRLHYHSNFADNRGHIDHSARVMKVITWNRSFKGVSNGEGAKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVSVLNKQKKRGASVDSLGKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVIEMANMWESMFMHHDSQLKIVTDLKSLDISQDQKETTKHHYDRTIQLWNVIQEWQSQFEKLVTQQKHYIQALNNWLKLNLIPIESNLKEKVSSPPRAHNPPIQTLLHAWHDYLDKLPDELAKSAISSFAAVIKTIILQQEEEMKLKEKCEEIQKEFMKKNQAFQDWYQKHLQKMGPEEADRGEEGNTNNPVSEKQFVVESLKKRLEEESESHKKLCVQVREKSLQSLKTRLPELFRALSDYTHACSDAYNRLKSIAQSQGGNAA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00051 720 PANTHER UNCHARACTERIZED 1 713 - -
Vivi3g00051 720 SUPERFAMILY Formin homology 2 domain (FH2 domain) 82 193 - -
Vivi3g00051 720 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vivi3g00051 720 Coils Coil 654 678 - -
Vivi3g00051 720 Coils Coil 196 216 - -
Vivi3g00051 720 Pfam Protein of unknown function (DUF632) 284 589 IPR006867 -
Vivi3g00051 720 MobiDBLite consensus disorder prediction 74 106 - -
Vivi3g00051 720 MobiDBLite consensus disorder prediction 55 109 - -
Vivi3g00051 720 Coils Coil 591 611 - -
Vivi3g00051 720 MobiDBLite consensus disorder prediction 145 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00051 Vivi-Chr3 674448 677584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00051 1 90 Acyl Lipid Metabolism Gene Families AT2G27090 32.039 4.10e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00051 - - gmx:100807189 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00051 3 674448 677584 Vivi3g00051 3 674448 677584 ECH