Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00050 ATGGAGAGTTTGCAAGAGAAGGCCTCTGAATGGAGTGGTGTTGAAACAGATCATGCTTTTGCCATTGATGATACCAATTTGTATCAAAAGCTAGGGCTTCAAACTTTCATAAACCTTTCCACCAATTTCTACAACAGAGTTTATGATGATGAGGAAGAGTGGTTTCGATCGATATTTGGCAAGTCTGATAAAGAAAAAGCAATTCAAAATCAGTATGAATTTCTTGTTCAGAGAATGGGTGGTCCTTCTCTTTATTCTCAAAGAAGAGGACATCCTGCTCTAATAGCTCGACATCGACCATTTCCTGTGACACAAGAAGCTGCCAAGAGATGGTTACATCACATGCAACAAGCATTAGACAACACTTCAGATATTGATCATGATTCCAACATCATGTTAATCAACTTTTTCAGGCACACTGCCTATTTTCTTGTGGCTGGAGTTGAGCAAAAGAATCAAAGCCTTCATCCTTGCAAGGATGCACCCGGAAGACACCCATGTAAAAACTTTTAG 513 0.3957 MESLQEKASEWSGVETDHAFAIDDTNLYQKLGLQTFINLSTNFYNRVYDDEEEWFRSIFGKSDKEKAIQNQYEFLVQRMGGPSLYSQRRGHPALIARHRPFPVTQEAAKRWLHHMQQALDNTSDIDHDSNIMLINFFRHTAYFLVAGVEQKNQSLHPCKDAPGRHPCKNF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00050 170 Gene3D Globins 1 151 IPR012292 GO:0019825|GO:0020037
Vivi3g00050 170 CDD TrHb2_AtGlb3-like_O 28 146 - -
Vivi3g00050 170 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 157 IPR044203 GO:0005344|GO:0015671
Vivi3g00050 170 Pfam Bacterial-like globin 26 142 IPR001486 GO:0019825
Vivi3g00050 170 SUPERFAMILY Globin-like 26 145 IPR009050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00050 Vivi-Chr3 630828 632659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00050 - - tpra:123898068 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00050 3 630828 632659 Vivi3g00050 3 630828 632659 ECH