Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00043 ATGTCTGATACTAGGACAAATCCAACATTCAGCAAATCAACTGGGTTGCCGCGAAAGCGCTTCTATAGAGCACGAGCTCACAGCAACCCGTTAAGCGACTCCCACTTCCCTGTGCCGTTAACACCCGCTCATGTTGACTATTCTCTCCATTATCCTCAAGCTGATAGTTCCAAAAAGATCAAGTTTGCTGATATTGGCTGTGGTTTTGGAGGACTGCTCATTAGTCTCTCGACTTTGTTCCCGGAAACACTGATGATTGGAATGGAACTTAGAGATAAAGTGTCCGAGTATGTAAAGGAACGGATTTTATCTTTAAGGGTTGCGAATCCGGGTCAATACCAAAATATTTCTGTGGTCCGAACTAACTCGATGAAGTACATTCCGAATCACTTTGAGAAAGCACAACTCTCGAAGATGTTTTTCCTGTTTCCTGATCCTCATTTTAAAGAGAAGAATCATCGTCGTCGGGTTATTAGCCCGTTCTTACTAGATGAGTATGCTTATGTTCTTGAGGTTGGTGGAATTATATACACGATAACAGACGTGGAAGAGCTTGGGGAATGGATGAAATCGTGTTTGGAGAATCACCCTCTGTTTGAACCATTGACTGAGAAAGAACTTGAAGCAGATCCAGCTGTTAAGCTTTTAACCTCTGCTACTGAAGAAGGCCAAAAGGTTGCTAGAAATGATGGACAAACTTTCCAAGCTGTTTTCAGACGCATTGCGCGATCTGATCAGATATCGTAG 747 0.4284 MSDTRTNPTFSKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPAHVDYSLHYPQADSSKKIKFADIGCGFGGLLISLSTLFPETLMIGMELRDKVSEYVKERILSLRVANPGQYQNISVVRTNSMKYIPNHFEKAQLSKMFFLFPDPHFKEKNHRRRVISPFLLDEYAYVLEVGGIIYTITDVEELGEWMKSCLENHPLFEPLTEKELEADPAVKLLTSATEEGQKVARNDGQTFQAVFRRIARSDQIS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00043 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 207 IPR029063 -
Vivi3g00043 248 CDD AdoMet_MTases 61 179 - -
Vivi3g00043 248 Gene3D Vaccinia Virus protein VP39 34 240 IPR029063 -
Vivi3g00043 248 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 16 240 IPR003358 GO:0006400|GO:0008176
Vivi3g00043 248 Hamap tRNA (guanine-N(7)-)-methyltransferase [METTL1]. 16 241 IPR025763 GO:0008176
Vivi3g00043 248 Pfam Putative methyltransferase 60 235 IPR003358 GO:0006400|GO:0008176
Vivi3g00043 248 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 240 IPR003358 GO:0006400|GO:0008176
Vivi3g00043 248 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 50 241 IPR003358 GO:0006400|GO:0008176
Vivi3g00043 248 FunFam tRNA (guanine-N(7)-)-methyltransferase 45 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00043 Vivi-Chr3 575181 576649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00043 K03439 - gmx:100806128 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00043 3 575181 576649 Vivi3g00043 3 575181 576649 ECH