Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00040 ATGGCGCCTTCGAAGCTTTTCGTCTTCGCTCTTTCCGTTGCCCTAATTTTCGTCATCGGTAGTTCCGAAGCCGACGTTTCAATCGAGGATTCTGATTCATCTGCTCTCAAGATCCAATTAGATCAACTTAACACCAAGATCCAATTTCTCGAGTCTCAAATCAGTGAGAAGTCTCAGGAATTGAAGAAGAAGGATGAGATAATAGCAGAGAAAGAAAAGCTTTTCAATGATAGGTCTAGTGCTATTCAGTCGTTGCAGAATGAGGTCGATTCTCTCCAGAAAAAAGGATCATTGGATGCTGAGGAGCGGGTTGTAAAGGCTAATGCACGTGCTGATGAACTACAGAAGCAGGTGGACAAGCTTAAAAGTGAACTTGACACACAAAACAGTGAGAAAGGGACCTGGGAAACTCGGGTAAATGAATTAGAGAAAAAGATTCCTGTTTTGAACTCAAAATTAGAGAAGATTCAAAAGATAAACGAGGAACAGAAGAAGCAAATCCGCAAAACTGAACGCGCTCTTAAAGTTGCTGAGGAAGAAATGTTGAAGGCAAAGCTAGAGGCAACTTACAGAGCAAAAGAGCTGAGCGAGACTCACGGTGCTTGGCTTCCGCCTTGGCTTGCTGTACACTACCTTCGTAGTAAGTCTGTGGTTGAGACTCATTGGAATGAACATGGGAAGCCTCTATTGGAAGTGATAACTCAAAAGGCCCTAGAGAAAAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATTTGGAAACAGTTAAAACTAAATGGATCCCAACTATGAATGAACACTGGTCTGTAGTGAAAACAAAGGTTGATCCTCATGTTCAACTACTGACTACAAAGACTGTTGAAGTTTACAAGTCCTCAAAGGATGCACTTACTCCCCACTTAAACAAGGGATTAGAATGTGTAGACCCTTATTATCAGGAAGTTCGAAAGTTTAGCAAGCCATACATAGATCAGGTCGCTACTGCCGCTAAGCCTCACGTCGAGAAAGTACAAGTAGTTCTGAAGCCCTACACAAAGAAGGTTGTTCATGCTTATGGGAATTTCTTGGAATCAGCCACTGCATATCATAGCCAGGTCCAAGCTACTGTCCAGGAGACACTGAAAAAACACGAACTTACTAGACCTCTTGCTACAAAAGAATTGGAATGGTTTGCGGCCTCTGCTCTTTTGGCCTTGCCTATAATTTTACTAGCTAGAGTTTTTTCAGCCATTTTCGGTAGCAAAAAGGCGGTTAAACCTGCTCGAAGTGGAAACACCCACCATGCTCGTCGTAAAGCTAAGCGAGGTCATCCAGACAAGTAG 1320 0.4311 MAPSKLFVFALSVALIFVIGSSEADVSIEDSDSSALKIQLDQLNTKIQFLESQISEKSQELKKKDEIIAEKEKLFNDRSSAIQSLQNEVDSLQKKGSLDAEERVVKANARADELQKQVDKLKSELDTQNSEKGTWETRVNELEKKIPVLNSKLEKIQKINEEQKKQIRKTERALKVAEEEMLKAKLEATYRAKELSETHGAWLPPWLAVHYLRSKSVVETHWNEHGKPLLEVITQKALEKKAQAGKWAEPHLETVKTKWIPTMNEHWSVVKTKVDPHVQLLTTKTVEVYKSSKDALTPHLNKGLECVDPYYQEVRKFSKPYIDQVATAAKPHVEKVQVVLKPYTKKVVHAYGNFLESATAYHSQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILLARVFSAIFGSKKAVKPARSGNTHHARRKAKRGHPDK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00040 439 Coils Coil 75 95 - -
Vivi3g00040 439 SUPERFAMILY Tropomyosin 33 198 - -
Vivi3g00040 439 Coils Coil 97 187 - -
Vivi3g00040 439 Gene3D - 30 203 - -
Vivi3g00040 439 MobiDBLite consensus disorder prediction 419 439 - -
Vivi3g00040 439 PANTHER OS08G0519400 PROTEIN 25 434 - -
Vivi3g00040 439 Coils Coil 33 67 - -
Vivi3g00040 439 SUPERFAMILY Apolipoprotein A-I 195 371 - -
Vivi3g00040 439 MobiDBLite consensus disorder prediction 420 439 - -
Vivi3g00040 439 Gene3D Apolipoprotein 228 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00040 Vivi-Chr3 542898 548878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00040 - - gmx:100781922 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00040 3 542898 548878 Vivi3g00040 3 542898 548878 ECH