Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00023 ATGACTTGGTGGGAAGGCGTTCAAGAATCCCGCGTTCTCGTTGCCCCTGATCCTGGTACCGATGGAAATGGTTCTGGACAAATGATATCGCTTCGTCATCCCAAATCTGGAAATGCAACGCAATATCTATTTGTAAATGGAATGCTACAAGAATTTCAATGGTTTAAGAACTTGTATGGGTCTTGGTTTTTGGGAGATTATACAAGTGAAGATGGTCGACTGTATTTATCCACGCCTGTTGATCCTGTTTTCATCATGCTGCCCATATTTGAGGAAGCTAGAATGAAGAAAGGCGACGATCTTGGCAAGTTCAGGCAATTGGATGAGATATTGTTTATTGATGGGTATCCAGGATATCAGCAGTTAATGGCGCTTGTGGAGAACTGTATGCAAGTAGTTTGTGAAGTCAAAGAAGTTGGATCCTTAAAATTCTTTAGACTCGATGACACAATGGTTCTGCGTTGGCTTTGCTATAAGGTCTGTCAGCTGAAACAGACACTGCCCAAGTTAGACAAAAACTACGCCGTTCAATCAGAGAAAGACACTTTGGTTGATGCGGTTTCAATATTAGGAGAGTATTTAAATGAAGAGCACTGGTTGCAGCCTTTGTGTAACCATCTTAAGTTAAATATACTTGAGGTGACAGGAAAATTACAACAAGCAAATGCCGAGGAAAGTAATCCCGGTTTGTATAATGATGTATTCCAGGAGGAACAGAATAATGACAAGAAGGCTACAGTTGTGAAGAAGGGTAGACAAGCAAAGAAAATAAAACTTGAGACAGAATCACATAACATCAGAGATATGTTTTCCAGGGCCTCCAGGAAGAAAAACTAA 837 0.405 MTWWEGVQESRVLVAPDPGTDGNGSGQMISLRHPKSGNATQYLFVNGMLQEFQWFKNLYGSWFLGDYTSEDGRLYLSTPVDPVFIMLPIFEEARMKKGDDLGKFRQLDEILFIDGYPGYQQLMALVENCMQVVCEVKEVGSLKFFRLDDTMVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLVDAVSILGEYLNEEHWLQPLCNHLKLNILEVTGKLQQANAEESNPGLYNDVFQEEQNNDKKATVVKKGRQAKKIKLETESHNIRDMFSRASRKKN 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00023 278 Gene3D - 80 208 - -
Vivi3g00023 278 PANTHER RIBONUCLEASE H2 SUBUNIT B 2 276 IPR040456 GO:0032299
Vivi3g00023 278 Gene3D - 8 79 - -
Vivi3g00023 278 FunFam Ribonuclease H2 subunit B 9 79 - -
Vivi3g00023 278 CDD RNase_H2-B 12 165 IPR040456 GO:0032299
Vivi3g00023 278 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 84 173 IPR019024 -
Vivi3g00023 278 Pfam Ydr279p protein triple barrel domain 27 81 IPR041195 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00023 K10744 - gmx:100305835 486.108
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00023 3 272421 275570 Vivi3g00023 3 272421 275570 ECH