Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00022 ATGGCAGGGTTGAACTTTGAAGCTGAATATGTTGATAGCTTTGATGTTCTCAAAGTTTTTGCAGCTCATGGTGTAGAGTTTCTCTTATCTTCTCAAGGAAAGGTACCTTTGTCAGATTGCAATGGAAAAATCATCTGTCTATTTTTCTCTGCCAACTGGTGTAGGCCTTGCAAGCTTTTCATTCCTCATCTTGTTGATCTTTATGAAACACTGAGGAAGAGAGGGGTAAATATAGAGATTATCTTTATCTCTTTTGATCGCGACGAGGACGGATTTAATGAACATGTCAAGAGTATGCCGTGGCTAGCGGTTCCATTTGATGTGAATTTGCATAGGAAGCTTATTGATAGATATCGGGTTGATCGAATCCCGTCGTTTGTTCCGTTATGTTCTGATGCCTTAACTGTTGATGAAAAAGTGATTGAGTGGATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAAAAAGAGACATGAGGAATTGAAAGATTTAGATAGAAGAAAACGCGAAGAAGTCAATTTGCAAGAATTGTTGACACGCGAAGGACGGGACTTTCTTATTGCTGGAGATGATAGAAAGGTGCTTGTATCTGAACTAGGCGGGAAAACGGTAGGCCTATTTTTCGGGGCTTACTGGTCTCCTCCTTGCCGCGCCTTCACAGTTCAGCTCACCGACGTATACAATAATCTTAACGATACAAAAGGTCGCTGCTTCGAGATTGTTTTCATTTCAACAGATAAGGACCTGAAAGAATTCAATATCAACAAAACTAGCATGCCTTGGCTTTCTATCCCATATGAAGACAGAACAAGGCATGACCTTTGCAGAATCTTCGACATAAAGAAAATTCCAGCTTTGGTCTTCATTGGACCGGATGGAAAAGTCGTTAGTTTGAACGGTAAGTTTATGGTCTCCTCATACGGCGCAGAAGCTTTCCCGTTTACCGAATCGAGGGTTAAAGATTTAGAATCGGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTCATGATGTCAAGCATGAACATGTACTCAAATTGGAAATGGCGAAAGCGTATGTATGCAATTCTTGTAAGAAGCAAGGCAAGTTCTGGTCATTCTTTTGTGATGTTTGTGACTATGATCTTCATCCAAGTTGTCTTGAGAAGGTCAACAAAGACTAA 1170 0.4085 MAGLNFEAEYVDSFDVLKVFAAHGVEFLLSSQGKVPLSDCNGKIICLFFSANWCRPCKLFIPHLVDLYETLRKRGVNIEIIFISFDRDEDGFNEHVKSMPWLAVPFDVNLHRKLIDRYRVDRIPSFVPLCSDALTVDEKVIEWIEDYGADAFPFTKKRHEELKDLDRRKREEVNLQELLTREGRDFLIAGDDRKVLVSELGGKTVGLFFGAYWSPPCRAFTVQLTDVYNNLNDTKGRCFEIVFISTDKDLKEFNINKTSMPWLSIPYEDRTRHDLCRIFDIKKIPALVFIGPDGKVVSLNGKFMVSSYGAEAFPFTESRVKDLESALRKEGEALPQQVHDVKHEHVLKLEMAKAYVCNSCKKQGKFWSFFCDVCDYDLHPSCLEKVNKD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00022 389 ProSiteProfiles Thioredoxin domain profile. 151 325 IPR013766 -
Vivi3g00022 389 Pfam Thioredoxin-like 202 296 IPR012336 -
Vivi3g00022 389 Pfam Thioredoxin-like 42 127 IPR012336 -
Vivi3g00022 389 PANTHER THIOREDOXIN 8 350 - -
Vivi3g00022 389 SUPERFAMILY Thioredoxin-like 32 132 IPR036249 -
Vivi3g00022 389 Gene3D Glutaredoxin 20 158 - -
Vivi3g00022 389 SUPERFAMILY Thioredoxin-like 191 298 IPR036249 -
Vivi3g00022 389 Pfam C1 domain 342 382 IPR004146 -
Vivi3g00022 389 Gene3D Glutaredoxin 178 317 - -
Vivi3g00022 389 ProSiteProfiles Thioredoxin domain profile. 16 149 IPR013766 -
Vivi3g00022 389 SUPERFAMILY Cysteine-rich domain 334 384 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00022 Vivi-Chr3 257371 259526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00022 K17609 - gmx:100778160 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00022 3 257371 259526 Vivi3g00022 3 257371 259526 ECH