Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00018 ATGGAGATTCGTGCCGATGCAGAAACTAGTTCATTTTCTTCAAGTTTGATTGCGGCAGTTTCGTATGGATTTGCTTCAATGGCGATGGTTTTTATCAATAAAGCTGTTCTTATGCAGTATTCGTATTCAATGACTCTACTCACTTTGCAGCAACTAGTTACTACTTTGCTTATACACTTTGGCCGAAAAATGGGATACACAAGAGCTAGAGGAGTGGATATGGAAACGGCCAAGCAACTGTTCCCGGTTTCATTTTTCTATAATGCCAATGTTGCATTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCAATAAAGAGGCTTACACCGCTTGCTGTACTTATCGCTGGATGTTTCATGGGGAAGGGGAGACCTACAACTCAGGTTACTCTCTCAGTGATATTGACTGCTGCTGGAGTTCTAATAGCAGCGCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCCTGGCTTTCATTTCAGTTTTCTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGAATGGACTTTCATCAGTGGAAATCATGTTCTACAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTTATTATAGCCACAGGGGAATTCCCATATTCTTTATCTGTATTATTTGCAAAGAGTTATTCTTTTTCATTTTTGATGATCCTTATTCTTTCGTTGGTGATGGGCATTGTTCTCAATTTCACCATGTTCTTGTGCACTATTGTTAATTCTGCTTTAACTACAACTATTGTGGGCGTTCTTAAAGGAGTTGGTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGACTGGATTGGTTATCAACACAGCTGGCGGCGTTTGGTATTCATATGCTAAATATCAGCAGAAAAAAAGTAAGACAGTGAAGCTAGTTACAGATGTGGAGACTCATCGTAAATAG 975 0.3959 MEIRADAETSSFSSSLIAAVSYGFASMAMVFINKAVLMQYSYSMTLLTLQQLVTTLLIHFGRKMGYTRARGVDMETAKQLFPVSFFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFMGKGRPTTQVTLSVILTAAGVLIAALGDFSFDLFGYSLAFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPYSLSVLFAKSYSFSFLMILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVGSTTFGFFLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQKKSKTVKLVTDVETHRK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00018 324 Pfam Triose-phosphate Transporter family 24 301 IPR004853 -
Vivi3g00018 324 PANTHER SOLUTE CARRIER FAMILY 35 16 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00018 Vivi-Chr3 228315 232252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00018 4 323 Lipid Metabolism Gene Families AT5G19980 25.740 4.73e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00018 K15281 - gmx:100777622 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00018 3 228315 232252 Vivi3g00018 3 228315 232252 ECH