Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00017 ATGGCTCCGAGGTTGGATTTTTCAAGTTGGTGGGTGAAGGATACACAGAAAGGGACACCAGTGGTGGTGAAAATGGAGAACCCCAGTTTCTCTGTTGTGGAGATTAGTGGTGCAGATGCTGCATTTAGGCCGGTGGAGAAGAATCGCGGTAAGAATGCTAAGCAAGTTACATGGGTTTTGCTGCTCAAGGCGCATCGTGCGGTTGGTTGTGTTACTTGGTTAGTGACTGTTCTTTGGGATTTGCTTGGAGGGATTAAGAAGAGGGTGGTTCAGAGACAAGGAGTGGCTGTTGAGAAAGGGAAGTTGTTGTTTAGGATTATTAGTTTGTTTTTAGTGATTTCTTTGGCTGTTTTGGCTTTTGAGGTTGTTGCTTATCTTCAAGGTTGGCATTTTGGGAATCATAATTTGCACATTCCTCATAGTTCTGATTTTGAAAGGTTGTTCCATGTGGCTTATGTTGCTTGGTTAACGTTCCGTGCTGAATACATTGCTCCACCAATTCAGGCGCTTTCGAAGTTTTGTATTGTTTTGTTTGTTATTCAATCTGTCGACCGTCTGCTTCTTTGTTTGGGGTGCTTTTGGATCAAACTCAGGAAGGTTAAGCCAAGAATTAGTGGGGACCCCTTCAAGGTTGATGATGTTGAAGGATCTGTATGCAAGTATCCAATGGTCTTGGTTCAAATTCCAATGTGCAATGAGAGGGAGGTGTATGAGCAATCTATTTCTGCAGTCTGCCAAATCGACTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGACGATTCTGATGATGAGAGCATACAATGGTTAATTAAGGCTGAGGTCTCTAAGTGGAACCAAAAGGGAATCAACATAATCTATCGGCATCGCCTAATCAGGACTGGATACAAAGCTGGAAATCTTAATTCTGCAATGAACTGTGACTATGTGAAAGACTATGAATTTGTTGCAATATTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTATGTGAACAAGGATGAAAATTTGTTGACCCGTCTTCAAAATATAAATTTATGCTTCCATTTTGAAGTAGAACAGCAGGTCAATGGGGTGTTTCTTAATTTTTTTGGTTTCAATGGAACTGCCGGTGTTTGGAGAATCAAAGCCCTTGAAGAGTCCGGAGGCTGGCTAGAGAGGACAACTGTAGAAGATATGGACATTGCTGTCCGAGCTCATCTTAATGGTTGGAAATTTATCTTCCTAAATGATGTAAAGGTACTTTGTGAAGTTCCCGAGTCATATGAAGCTTACAGAAAGCAACAACACCGCTGGCATTCAGGGCCTATGCAACTTTTCAGGCTGTGTCTCCCAGCAATTTTGAAATCTAAGGTATCACCATGGAAGAAAGCAAACTTAATTCTGCTATTTTTTCTGCTAAGGAAATTAATCCTTCCCTTTTACTCGTTCACTTTATTTTGCATAATCCTTCCTCTAACCATGTTTGTCCCAGAGGCTGAACTCCCTTTATGGTTAATCTGCTATGTTCCGGTATTCATGTCGATCCTGAACATTCTTCCCGCACCTAAATCTTTTCCTTTTATTGTTCCCTACCTCCTTTTTGAAAACACCATGTCTGTTACTAAATTCAATGCAATGGTATCTGGTCTTTTCCAATTGGGTAGCTCTTATGAATGGATTGTCACAAAGAAAGCTGGAAGGTCGTCCGAGTCCGATTTACTTGCTGCTGCAGAAAGGGAAACTAAGTCAATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACAGCGAACTTGTTGAGTTACACCAATTGAAGGAACTCAAAGAAGCAGCTGTAGAACCTGTTAAGAAAGCTAATAAGATATATAAGAAAGAACTGACTTTGGCATTCCTTCTTCTCACTGCTTCTGTCAGAAGTCTGTTATCTGCACAAGGAGTTCATTTCTACTTTCTGCTTTTCCAAGGAATAACTTTCCTCCTTGTAGGCCTCGATTTGATTGGAGAACAAATGAGCTAG 2064 0.4104 MAPRLDFSSWWVKDTQKGTPVVVKMENPSFSVVEISGADAAFRPVEKNRGKNAKQVTWVLLLKAHRAVGCVTWLVTVLWDLLGGIKKRVVQRQGVAVEKGKLLFRIISLFLVISLAVLAFEVVAYLQGWHFGNHNLHIPHSSDFERLFHVAYVAWLTFRAEYIAPPIQALSKFCIVLFVIQSVDRLLLCLGCFWIKLRKVKPRISGDPFKVDDVEGSVCKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSDDESIQWLIKAEVSKWNQKGINIIYRHRLIRTGYKAGNLNSAMNCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSYVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILKSKVSPWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWLICYVPVFMSILNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERETKSIEQQKIHRGASDSELVELHQLKELKEAAVEPVKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGITFLLVGLDLIGEQMS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00017 687 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 147 684 - -
Vivi3g00017 687 SUPERFAMILY Nucleotide-diphospho-sugar transferases 224 501 IPR029044 -
Vivi3g00017 687 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 216 441 IPR029044 -
Vivi3g00017 687 Pfam Glycosyl transferase family group 2 316 518 IPR001173 -
Vivi3g00017 687 FunFam probable xyloglucan glycosyltransferase 5 215 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00017 Vivi-Chr3 210451 214123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00017 1 687 Miscellaneous Gene Families AT4G31590 80.375 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00017 - - gmx:100776577 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00017 3 210451 214123 Vivi3g00017 3 210451 214123 ECH