Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00014 ATGGACTATTCTAACCTCAACTATGACGTCATCATCATCGGCGCTGGCGTCATGGGAAGTTCCACCGCCTACTACACCGCCAAAACCGGTCTCAAAACACTTCTACTAGAACAATTCGATTTCCTCCACCACCGTGGCTCCTCCCACGGCGAATCCCGCACCATCCGTGCATCTTATCCCAAAAACCCTTACTACAGTTTGGTAATCAAATCGTACGATCTATGGCGAGAAGCTCAAGCTCAAGCAGGGTTCAAAGTTTTCTACGAGGCTCGTCACTTTGACATGGCTCCTTCCAACGATCCAACTTTTGTTTCTGTAGTCGAAAACTGTAGAGAAAACAACGTCGACCACCAACTCCTCCGCCGCGAACAAGTCGTTGATGAATTCTCCGGTAGGATTGATATTCCGGATGACTGGTCTGGTCTTTTAACTGAGCACGGCGGGGTGATAAGAGCCACGAAAGCGGTGGCGATGTTTCAGACACTGGCGCGGAACCATGGTGCTGTTTTGAAGGATAACATAGAGGTAACGGATATAAAAAACGACGGTGGTGTTGTCGTTTTAACTACCGCGAACAACGAGAGTTTTCGCGGCAAGAAATGTGTAGTAACGGTGGGAGCATGGGCGAGTAAACTTGTTGAAAAGATCTTTTGTGTTCAACTTCCGATTCAACCTTTAGAAACTCTGGTTTGTTACTGGAGAATAAAAGAAGGGTATGAAGGGAAATTCGCAATTCGGGGCGATTTTCCGAGGTTTGCTAGTTTTGGTAGGGTTTGTTTGTATGGAACTCCGAGTTTGGAGTATCCGGGTTTGATTAAAGTGGCGGTTCATAGCGGTAACCCGTGTGATCCGGATAAGAGGCCGTGGGGTTGTGGTGTGATGATGGGTGAGATGAAAGAGTGGGTTGAAGGGAGATTTTGTGGGTTGGTTGATTCGAGTGAGCCTGTGATGAAACAGTCTTGTATGTATTCGATGACTCCTGATGAGGATTTTGTGATTGATTTCTTGGGTGGTGAGTTTGGGAAGAGTGTGGTTTTGGGGGCTGGGTTTTCGGGTCACGGGTTTAAGATGGCTCCGGTTGTTGGGAAGATATTGACTGATCTTGTGGTGGATGGGGAAACTAGTGAAGTTGATTTGAAACATTTCAGGATTGGAAGATTCAATGTGGCTTCTTAG 1176 0.4685 MDYSNLNYDVIIIGAGVMGSSTAYYTAKTGLKTLLLEQFDFLHHRGSSHGESRTIRASYPKNPYYSLVIKSYDLWREAQAQAGFKVFYEARHFDMAPSNDPTFVSVVENCRENNVDHQLLRREQVVDEFSGRIDIPDDWSGLLTEHGGVIRATKAVAMFQTLARNHGAVLKDNIEVTDIKNDGGVVVLTTANNESFRGKKCVVTVGAWASKLVEKIFCVQLPIQPLETLVCYWRIKEGYEGKFAIRGDFPRFASFGRVCLYGTPSLEYPGLIKVAVHSGNPCDPDKRPWGCGVMMGEMKEWVEGRFCGLVDSSEPVMKQSCMYSMTPDEDFVIDFLGGEFGKSVVLGAGFSGHGFKMAPVVGKILTDLVVDGETSEVDLKHFRIGRFNVAS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00014 391 SUPERFAMILY FAD-linked reductases, C-terminal domain 225 327 - -
Vivi3g00014 391 Gene3D - 63 327 - -
Vivi3g00014 391 PANTHER PEROXISOMAL SARCOSINE OXIDASE 7 389 IPR045170 GO:0016491|GO:0050660
Vivi3g00014 391 SUPERFAMILY FAD/NAD(P)-binding domain 7 387 IPR036188 -
Vivi3g00014 391 Gene3D - 9 374 IPR036188 -
Vivi3g00014 391 Pfam FAD dependent oxidoreductase 9 368 IPR006076 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00014 Vivi-Chr3 193306 196808 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00014 K00306 - zju:107429922 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00014 3 193306 196808 Vivi3g00014 3 193306 196808 ECH