Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00007 ATGAGTCTTACATCGGCAGCGTACGTTGCTCGGCGCGCGGCGCAGAAGGAGAAGGTTCGGATTTTGTATCGCCGCGCCCTTAAAGACACTCTCAACTGGGCCGTACATCGCCACCTATTCTACGACGACGCTGCAAACCTCCGCGATCGGTTCGAGCAAAACAAGCACGTTGAAGATCCTGATACCATTGATAGGTTAATAGTGGATGCTGAAGCTAGCTACAATAAGTGGCGCCATCCTGATCCCTATATTGTTCCATGGGCACCTGGTGGTTCCAAGTTTACTCGCAACCCACCTCCACCTGAAGGGATTGAGATAATTTATGATTATGGGCGTGAAGACAACAACTGA 351 0.5043 MSLTSAAYVARRAAQKEKVRILYRRALKDTLNWAVHRHLFYDDAANLRDRFEQNKHVEDPDTIDRLIVDAEASYNKWRHPDPYIVPWAPGGSKFTRNPPPPEGIEIIYDYGREDNN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00007 116 CDD Complex1_LYR_NDUFB9_LYRM3 15 91 IPR045292 -
Vivi3g00007 116 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT 4 112 IPR033034 GO:0006120
Vivi3g00007 116 Pfam Complex 1 protein (LYR family) 19 71 IPR008011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00007 Vivi-Chr3 104047 108319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00007 K03965 - gmx:100305723 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00007 3 104047 108319 Vivi3g00007 3 104047 108319 ECH