Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00006 ATGGCGAGTGGTGCTAGTGCGATGCAGCGGTGCACCGTCGCTGCGAGGTGGTTGATAAGAGGAGCCTCGACGGAGACGCCGTCTTCTTGTTCCGGCGTAGCAGCTCCGATATTGTGCGGTCGCGGTGATAAAAAGACGAAGAAAGGGAAGAGATTCAAGGGATCTTACGGCAAATCTCGTCCGAAGAGGGAACAAATGATTGAGCGGATGAAAGATAAGGTTGAAGTTCCCAGGTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATTTGA 270 0.5222 MASGASAMQRCTVAARWLIRGASTETPSSCSGVAAPILCGRGDKKTKKGKRFKGSYGKSRPKREQMIERMKDKVEVPRSTPWPLPFKLI 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00006 89 NCBIfam 30S ribosomal protein THX 40 63 IPR030826 GO:0005840
Vivi3g00006 89 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 17 89 IPR044695 -
Vivi3g00006 89 MobiDBLite consensus disorder prediction 44 63 - -
Vivi3g00006 89 Pfam Ribosomal protein S31e 26 81 IPR030826 GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00006 Vivi-Chr3 98647 99232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00006 K19033 - gmx:113001441 117.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00006 3 98647 99232 Vivi3g00006 3 98647 99232 ECH