Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07869 ATGAAAATCTCCAAAGAAACATGTTACTCTTCTTACACTAACCTCCTATGGCCATGCCAACCTCGTACGGAACAAAACCACATTGTTTTCTCCAACCGCTTTCGTGTCACCTGCACTGTAAGCCTCCTACTCTTATTCACCACCGTCTACATTTTCTGGCCGTCGGATCCGTATCTCAAGATCGTACGGCTGAAACTGAAGAAGATTAAGGTACACCGTGTGCCGCATATCACCGTAGACATCTCCATGGTCCTCACGCTGAGAGTGCAAAACGCTGACGTGTATTCCATGGACTTTGGTGCGGTTGACGTGGCGGTGTCTTATAGAGGGAAGCCACTAGGGCACGTGACGTCGGAGAATGGTCACGTGAGAGCTATGGGTTCTTCGTTTGTGGATGCTGACGCGGAGTTTTCCGGCATCGGTGTTTTGCCGGAGATATTGTTGTTGCTGGAGGATTTGGCTAAGGGAACGGTGCCGTTTGATACAGTTAGTCAAGTTAAGGGCAAAATGGGGATTTTCTTCTTTCACTTTCCCATTAAGGCAAAATTAACATGCGAGATATTGGTGAGTACGATAAATCAAACAATTGTTCGTCAACACTGTCTTTATGAGTGA 615 0.4667 MKISKETCYSSYTNLLWPCQPRTEQNHIVFSNRFRVTCTVSLLLLFTTVYIFWPSDPYLKIVRLKLKKIKVHRVPHITVDISMVLTLRVQNADVYSMDFGAVDVAVSYRGKPLGHVTSENGHVRAMGSSFVDADAEFSGIGVLPEILLLLEDLAKGTVPFDTVSQVKGKMGIFFFHFPIKAKLTCEILVSTINQTIVRQHCLYE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07869 204 Gene3D - 55 189 - -
Vivi2g07869 204 SUPERFAMILY LEA14-like 43 169 - -
Vivi2g07869 204 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 201 - -
Vivi2g07869 204 Pfam Late embryogenesis abundant protein 86 184 IPR004864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07869 - - psat:127087501 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07869 2 227741184 227742335 Vivi2g07869 2 227741184 227742335 ECH
Vivi2g07869 2 227741184 227742335 Vivi5g00379 5 5264773 5266179 PCT