Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07334 ATGGCAACACTTGGTGCTGCCAAATTCCTCCTATGCTTCTCAATAATATGGCTCTTCAACTTCCTACCTCTATGCCAAGGTAACGATAAGTGGAGCAATATTAATGAATATAAGTATCCATTTATAAGAAAAGCAAGTTCATTTGAATCTCCACCTTCAGTTTCAACCACCAACACAAACAATGGTTATGACTACATAATAGTAGGTGGTGGAACAGCAGGATGTCCTTTAGCTGCAACACTTTCAAAGAAATTCAATGTTTTGTTACTTGAGAGAGGGGGTGTCCCTTTCACAAACCCTAATGTCTCATTTCTTGACAACTTTCATATCACATTGGCTGATACCTCACCAACTTCAGCTTCACAATTCTTTATTTCAACGGATGGAGTTTTTAATGCAAGAGCTAGGGTTTTGGGGGGTGGTAGCTCCATTAATGCCGGCTTCTACACTAGAGCAAGCTCAAGATTTATAGAGAAAATGGGGTGGGATGCAAAGCTAGTAAACGAGTCATATCCTTGGATTGAAAAACAAATTGTTCATCGTCCTACATTTTCACATTGGCAAAGAGCATTGAGAGATGGACTTCTAGATGTTGGTGTGTCACCTTTTAATGGATTCACCTATGAACATAAATATGGAACCAAAGTTGGTGGAACCATTTTCGACAGATTCGGTCGACGCCACACTGCTGCAGAATTGCTTTCTTCTGGAAATCCAGACAAACTCACTGTTTTGATCTATGCTACTGTCCAAAACATTGTTTTTGATACAACAGGAAAAAGGCCTAGAGCTATTGGAGTAAATTTCAAGGATGAAAATGGGAAAATGCATAAGGCAATACTAGGAAATGATATGCAAAGTGAAGTGATTGTGACGAGCGGCGCGATCGGGACGCCTCAAATGCTGTTGCTTAGTGGAATTGGTCCGAGAGAAGAACTCGAGAAGTTGAAGGTTTCTGTGGTGCTTGATAACAAATTTGTCGGGAAGGGTATGGCTGATAACCCGATGAACACGATATTTGTTCCTCTTAAGAAACCGGTTAAGCAGTCGTTGATCGAGACAGTTGGTATTACTGATAAGGGTGTGTATATTGAAGCAAGCTGCGGGTTTGGACAGACCAATGAAAGTATTCATTGTCATCACGGTTTGTTGTCCGCTGAGATTGGTCAGCTTTCAACAATTCCACCAAAGCAAAGAACGGTCGAAGCTGTTAAAGCTTTTGCGAAGAACAAAAGAGACATTCCAATTGAAGCATTCAAGGGAGGTTTCATCTTATCAAAAGTTGCGAATCCATGGTCAACCGGTGAACTCAAATTGATCAACACAAATGTGGATGACAACCCTTCTGTTTCCTTCAACTACTTCAGTCACCCTTACGATCTTAATCGCTGTGTCGAAGGAATCCGGTTAGCCTCAAAAGTTGTTCAGTCAAAGCATTTCACAAACCTCACTTTGTGTGACAGACAAACTACAGAACAGTTTCTCAACAACACTGTGAAGGCTAATGTGAACCTTATACCAAAGCATGTCAATGACACAGAATCACTTGAACAGTTTTGTAGAGACACTGTGATCACTATTTGGCATTATCATGGTGGATGCCATGCTGGGAAGGTTATCGACTCAGATCATAAGGTTCTTGGTGTTAACAGACTTCGTGTCGTAGATGGCTCGACGTTTACCGAGTCGCCAGGAACTAATCCTCAAGCTACTGTCATGATGATGGGCAGGTACATGGGAGTGAAGATTTTAAGAGAAAGGTTGGGGAAATTTGCTGGTGTTTGA 1785 0.4134 MATLGAAKFLLCFSIIWLFNFLPLCQGNDKWSNINEYKYPFIRKASSFESPPSVSTTNTNNGYDYIIVGGGTAGCPLAATLSKKFNVLLLERGGVPFTNPNVSFLDNFHITLADTSPTSASQFFISTDGVFNARARVLGGGSSINAGFYTRASSRFIEKMGWDAKLVNESYPWIEKQIVHRPTFSHWQRALRDGLLDVGVSPFNGFTYEHKYGTKVGGTIFDRFGRRHTAAELLSSGNPDKLTVLIYATVQNIVFDTTGKRPRAIGVNFKDENGKMHKAILGNDMQSEVIVTSGAIGTPQMLLLSGIGPREELEKLKVSVVLDNKFVGKGMADNPMNTIFVPLKKPVKQSLIETVGITDKGVYIEASCGFGQTNESIHCHHGLLSAEIGQLSTIPPKQRTVEAVKAFAKNKRDIPIEAFKGGFILSKVANPWSTGELKLINTNVDDNPSVSFNYFSHPYDLNRCVEGIRLASKVVQSKHFTNLTLCDRQTTEQFLNNTVKANVNLIPKHVNDTESLEQFCRDTVITIWHYHGGCHAGKVIDSDHKVLGVNRLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRERLGKFAGV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07334 594 Pfam GMC oxidoreductase 431 577 IPR007867 GO:0016614
Vivi2g07334 594 ProSitePatterns GMC oxidoreductases signature 1. 135 158 IPR000172 GO:0016614|GO:0050660
Vivi2g07334 594 Pfam GMC oxidoreductase 63 335 IPR000172 GO:0016614|GO:0050660
Vivi2g07334 594 SUPERFAMILY FAD/NAD(P)-binding domain 57 586 IPR036188 -
Vivi2g07334 594 PANTHER OSJNBA0019K04.7 PROTEIN 23 588 - -
Vivi2g07334 594 PIRSF Alcohol_oxidase 41 592 IPR012132 GO:0050660
Vivi2g07334 594 Gene3D - 63 576 IPR036188 -
Vivi2g07334 594 Gene3D - 180 526 - -
Vivi2g07334 594 ProSitePatterns GMC oxidoreductases signature 2. 294 308 IPR000172 GO:0016614|GO:0050660
Vivi2g07334 594 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07334 Vivi-Chr2 217217563 217221749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07334 63 589 Miscellaneous Gene Families AT3G56060 50.282 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07334 K15403 - gmx:100779461 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07334 2 217217563 217221749 Vivi2g07334 2 217217563 217221749 ECH
Vivi2g07334 2 217217563 217221749 Vivi7g03702 7 102940019 102944630 PCT