Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07332 ATGTGGAACATGTCAACAGTGATTCTTCTGCTACTTCTTCAGTTTTCATTTTCTCTTATTGGTTATACTACAGCTTCTGTGTCTTATGACTCTAAAGCTATCACCATTAATGGACAAAGAAGGGTTCTCATTTCTGGATCCATTCATTATCCAAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCTAAAGAAGGAGGTTTAGATGTGATTCAGACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAATATTATTTTGAGGGGAACTATGATTTGGTGAAGTTCATAAAGGTGGTGCAGCAAGCTGGTCTCTATGTTCATCTAAGGATTGGTCCATATGTTTGTGCTGAGTGGAACTTTGGGGGTTTTCCTGTTTGGTTGAAGTACATTCCTGGAATCAGTTTCAGAACAGACAATGAACCATTTAAGTTTCAAATGCAAAAGTTTACTGAGAAGATTGTTGGTATGATGAAAGAAGAAAGGTTATATGAGTCTCAAGGTGGTCCAATAATTCTATCCCAGATTGAAAATGAATATGGACCTGTGGAGTATGAAATTGGTGCTCCTGGTAAGTCCTATACAAAATGGGCAGCAGATATGGCTATAGGACTCGGTACCGGAGTGCCGTGGATAATGTGCAAGCAAGATGATGCTCCTGACCCTGTTATTAACACCTGCAATGGCTTCTATTGCGATTATTTCTCTCCAAATAAGGCTTCTAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTCCGGTACCTCACCGACCGGCTGAAGACATGGCGTTTTCAGTTGCAAGATTTATACAAAAAGGGGGATCGTTTATCAATTATTACATGTATCATGGAGGAACAAATTTCGGTAGAACTGCTGGTGGTCCTTTCATTGCTACAAGCTATGACTATGATGCACCTCTTGATGAATATGGATTGCTGAGGCAACCGAAATGGGGTCATCTTAAGGATTTACACAGAGCAATAAAACTCTGTGAACCTGCTTTAGTTTCTGGAGATCCTACCCTTACACGGATCGGAACCTATCAAGAGGCTCATGTGTTTAAATCGAAGTCGGGAGCTTGTGCTGCGTTTCTTGCAAACTATAATCCAAAATCTTTTGCAACAGTGCCATTTGGAAATATGCATTACAACTTACCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAAACAACGGTTTATAACACTGCAAGGGTTGGTTCGCAGAGTGCCCAGATGAAGATGAGTCTCATTCCTATTCACGGTGGACTCTCTTGGGAAGTGTTTACTGAACAAACAGCCTCAACTGATGATAGTTCCTTCACCATGACTGGTCTATTGGAGCAGTTAAATACAACGAGAGATTTAACCGATTACTTGTGGTACTCAACAGATGTTGTAATTGATCCCAATGAAGGATTTTTGAGGGGTGGAGACGATCCTGTTCTTACGGTGTTATCCGCTGGGCATGCTATGCATGTTTTTGTCAATGGTCAACTGTCAGGAACTATATATGGAAGCTTGGAATTCCCTAAGCTAACATTTAGCCAGAGTGTGAAGCTCAGACCCGGTGTCAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGACTCCCGAATGTTGGCCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCGATTACGCTAAATGGTCTTGATGAAGGTAGAAGAGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTGGTCTCAATGGTGAAGCGTTGAGTCTTCATTCTCTTAGTGGAAGTTCCTCAGTGGATTGGGTTCAAGGAAGTTTAGTTTCTCAAATGCAGCCGTTGACTTGGTACAAAACTACTTTTGATGCCCCGGCCGGAGTTGCACCGTTTGCTTTAGACATGGGAAGCATGGGAAAAGGACAAGTGTGGCTAAACGGACAGAATCTCGGCCGTTACTGGCCTGCTTATAAAGCAGCATCTGGTAAATGTGATAACTGTGACTATGCAGGAACTTATACCGAGAATAAATGTAGAAGTAACTGTGGCGAAGCTTCTCAAAAATGGTACCACATTCCTCGTTCGTGGTTGGAACCAACCGGAAATCTATTGGTTGTGTTTGAAGAATTGGGCGGAGATCCGAATGGAATCTTTTTGGTTAGAAGGGATATAGACAGTGTATGTGCGGATATTTACGAGTGGCAACCGAATCTTATAAGTTATCAAATGCAAAGTTCTGGCAAATCTACAAAACCTATTAGACCAAAAGCTCATCTATCATGTGGCCCTGGACAGAAAATATCATCAATCAAATTTGCTAGCTTTGGTAATCCAGTAGGGTCTTGTGGAAACTTCCATGAAGGAAGTTGCCATGCTCACAAGTCTTATAATGCTTTTGAAAAGAATTGCGTTGGACAGAACTCGTGCAAGGTAACGGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAACTCTCGGTCGAGGCCATTTGTGCCTGA 2526 0.4216 MWNMSTVILLLLLQFSFSLIGYTTASVSYDSKAITINGQRRVLISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKVVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKFQMQKFTEKIVGMMKEERLYESQGGPIILSQIENEYGPVEYEIGAPGKSYTKWAADMAIGLGTGVPWIMCKQDDAPDPVINTCNGFYCDYFSPNKASKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTLTRIGTYQEAHVFKSKSGACAAFLANYNPKSFATVPFGNMHYNLPPWSISILPDCKTTVYNTARVGSQSAQMKMSLIPIHGGLSWEVFTEQTASTDDSSFTMTGLLEQLNTTRDLTDYLWYSTDVVIDPNEGFLRGGDDPVLTVLSAGHAMHVFVNGQLSGTIYGSLEFPKLTFSQSVKLRPGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLDEGRRDLSWQKWSYKVGLNGEALSLHSLSGSSSVDWVQGSLVSQMQPLTWYKTTFDAPAGVAPFALDMGSMGKGQVWLNGQNLGRYWPAYKAASGKCDNCDYAGTYTENKCRSNCGEASQKWYHIPRSWLEPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQSSGKSTKPIRPKAHLSCGPGQKISSIKFASFGNPVGSCGNFHEGSCHAHKSYNAFEKNCVGQNSCKVTVSPENFGGDPCPNVLKKLSVEAICA 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07332 841 Pfam Glycosyl hydrolases family 35 34 338 IPR031330 -
Vivi2g07332 841 Gene3D - 598 732 - -
Vivi2g07332 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Vivi2g07332 841 CDD Gal_Rha_Lectin_BGal 758 840 - -
Vivi2g07332 841 FunFam Beta-galactosidase 445 582 - -
Vivi2g07332 841 FunFam Beta-galactosidase 590 732 - -
Vivi2g07332 841 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Vivi2g07332 841 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Vivi2g07332 841 FunFam Beta-galactosidase 22 342 - -
Vivi2g07332 841 Gene3D - 749 841 IPR043159 -
Vivi2g07332 841 SUPERFAMILY Galactose-binding domain-like 401 572 IPR008979 -
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 Gene3D Glycosidases 21 342 - -
Vivi2g07332 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Vivi2g07332 841 PANTHER BETA-GALACTOSIDASE RELATED 16 742 IPR001944 GO:0004553|GO:0005975
Vivi2g07332 841 FunFam Beta-galactosidase 291 419 - -
Vivi2g07332 841 FunFam Beta-galactosidase 751 841 - -
Vivi2g07332 841 Gene3D - 439 584 - -
Vivi2g07332 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Vivi2g07332 841 SUPERFAMILY Galactose-binding domain-like 581 749 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07332 Vivi-Chr2 217121481 217126383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07332 4 841 Glycoside Hydrolase AT3G13750 78.878 0.0 1411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07332 - - gmx:100811187 1583.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07332 2 217121481 217126383 Vivi2g07332 2 217121481 217126383 ECH
Vivi2g07332 2 217121481 217126383 Vivi7g03708 7 102994769 103000324 PCT