Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07172 ATGTTTTGGAAACTCGCATCTCTTTCTGCTTCCTCTCCCGTGGAGGCTATATTAGACAAGGATAATTTCACTTTAGAAGAGCTTCTAGATGAGGAGGAAGTAATCCAAGAATGCAAGGCCTTGAACAGTCGTCTTATCAATTTTTTGAGAGATCCAGCTCAGGTTGAGCAATTGCTACGCTACATTATCGAAGAACCACCTCAGGATGCCGAAAGCAAACGGACCTTCAAGTTTCCATTCATTGCCTGCGAGATTTTTACATGTGAAATTGATGTCATCTTGAAGACTTTGGTGGATGAAGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCGAATCGTTCCCATAGTGCCTTATTGGCTGGCTACTTTAGCAAGGTTGTTGTCTGCCTAATGATTCGAAAGACAGTGTCACTTATGAATTATGTTCAGGCCCATCAGAATGTTTTTCGCCAATTGGTTGATTTGATTGGAATCACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCCGATGACCATGTGTATCCCAATTTTATTGATGTGATGCAATGGTTGGCCGAGAGCAACCTGCTCGAAATGATTGTTGATAAATTAAGTCCATCTTGTCCCGCTGAAGTTAATGCCAATGCAGCTGAAACATTATGCACAATAACACGAAATGCTTCATCTACTCTGGCAATTAAATTATCAAGCCCAAGTTTTGTCGCAAGAATTTTGGGTTATGCATTGGAAGATTCACAATCAAAGTCTACCCTTGTGAACTCACTTTCTGTGTGTATTTCTTTGTTGGACCCGAAAAGATCTAATGTACCATCTCCCCTTTTTCATTCATTCCGAAGTCAACACATGTATGAGCCACATATTCCTGTAAATCCAGAGACTATTAGTGCAATGCTCCCTAAACTCAGTGACTTGCTAATGCTTTTGAATGTGTCGTCCGATGAGAAAGTATTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGGAAGCATAGATTAAAGATTGTCGAGTTCATTGCAGTCCTCTTAAAAACCGGAAATGAGGCTGCAGAAAAAGAAATGGTCAACTCAGGAACCATTCAACGAGTTATTGATCTTTTTTTCGAGTATCCATATAATAATTCATTACACCATCATGTTGAAAGTATTGTATTATCATGTTTGGAGAGTAAAACTGATGCCATTGTTAATCATCTTCTGCGAGATTGTGATTTAATTGGAAGGGTTATCCAAGCAGATAAACATTCTGTTCTCTCTTCCGAAAGAAATCTGCCAACTGTACCTGCTACTGGAAAACAGGCACCACGGGCAGGAAACATTGGCCATATTACTCGAATTGTTAACAAACTTGTTCACTTGACACACAGCCGAAGCAACATACTGACATGTCTTCAGGAGAATAGTGAATGGAATGAATGGCAAGCTACTGTGCTTCAGAACCGTAATGTGGTTGAGAATGTTAACCGTTGGGCTTGTGGACGCCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGACGACGACATTCATGACAGGGACTATGATGTTGCAGCTTTAGCTAATAATTTGAGTCAGGCCTTTAGATATAAACTTTATGGGAACGAAGATAATGAAGAGGAACGTGGAAGCCATGATCGAGATGATGAGGATGTCTACTTTGATGACGATTCTGCCCAAGTAGTCATATCGTCTCTGAGACTCGGTGACGAACAAGGGAGTAGCCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGACGACAGAATTGGTGATGCCAATGGAGGCACAACATCATCTGATATGATGGATGAGATAAACTTGAATGGTGCTGCTAATGGTGGTAACAACAGTGACGATGAGGTAGTTGTTGGAGAGGATGAAGAATTGGATGAAAGCAAAAATACTATGAATGACACATCTAGCTCTAGCACAAACTTCTTCGGTGGATTACCAGGTAGCAATTCCGGGAATGGAGGTGCTTCAAATGATACGGGTTTCTTCAGATTTGAGGCATCAGACAAGGAAGAGTGTTTTGGTGACAGGCCTTTGCCAGATTGGGTGGGATGGGGAGAACCTTCAGATATGCAAGTTACCGGCGCAAGCATGAATCCATTTGTGGACCATGATGAGTCTGGTAGCAATCCTTCTACTAAGCCTCAAATAGGTAGCCCTAATTCTAATTCTCCAAAGTCAGAATCTGTTTCTTCGAATGGTTCACCAAATAGTTCGCCAAATAGTAAAGATTTGATTGATGGGGTTGGCGACTCAACTCAAAGATCCGCAGCAGTGCCCTCACTATTTGAGGAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTCTTAAAGAGGGGATAGTTGGGGAAGCAGGACCGTTGAAAAGAAACATGTCCCCAAAAGCGGCAGAAAAGGAAAATTCCGAGGATGGTAATCCTGGAATGAAGGAATTCAACGATGCCAATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA 2538 0.4177 MFWKLASLSASSPVEAILDKDNFTLEELLDEEEVIQECKALNSRLINFLRDPAQVEQLLRYIIEEPPQDAESKRTFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMIRKTVSLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSPSCPAEVNANAAETLCTITRNASSTLAIKLSSPSFVARILGYALEDSQSKSTLVNSLSVCISLLDPKRSNVPSPLFHSFRSQHMYEPHIPVNPETISAMLPKLSDLLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEAAEKEMVNSGTIQRVIDLFFEYPYNNSLHHHVESIVLSCLESKTDAIVNHLLRDCDLIGRVIQADKHSVLSSERNLPTVPATGKQAPRAGNIGHITRIVNKLVHLTHSRSNILTCLQENSEWNEWQATVLQNRNVVENVNRWACGRPTALQDRMRDSDDDDIHDRDYDVAALANNLSQAFRYKLYGNEDNEEERGSHDRDDEDVYFDDDSAQVVISSLRLGDEQGSSLFTNSNWFAFQDDRIGDANGGTTSSDMMDEINLNGAANGGNNSDDEVVVGEDEELDESKNTMNDTSSSSTNFFGGLPGSNSGNGGASNDTGFFRFEASDKEECFGDRPLPDWVGWGEPSDMQVTGASMNPFVDHDESGSNPSTKPQIGSPNSNSPKSESVSSNGSPNSSPNSKDLIDGVGDSTQRSAAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMSPKAAEKENSEDGNPGMKEFNDANYWRVDQEVAVLE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07172 845 MobiDBLite consensus disorder prediction 801 832 - -
Vivi2g07172 845 MobiDBLite consensus disorder prediction 712 768 - -
Vivi2g07172 845 MobiDBLite consensus disorder prediction 611 671 - -
Vivi2g07172 845 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 816 IPR007587 GO:0019903|GO:0043666
Vivi2g07172 845 MobiDBLite consensus disorder prediction 688 771 - -
Vivi2g07172 845 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Vivi2g07172 845 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Vivi2g07172 845 MobiDBLite consensus disorder prediction 640 667 - -
Vivi2g07172 845 MobiDBLite consensus disorder prediction 810 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07172 Vivi-Chr2 214833077 214841750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07172 K15501 - gmx:100802276 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07172 2 214833077 214841750 Vivi2g07172 2 214833077 214841750 ECH
Vivi2g07172 2 214833077 214841750 Vivi5g02384 5 101379537 101388962 PCT