Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06741 ATGTCTTTTGCAGCTCCTACTCATGCAGAACCTAAAATCACACGACCTACTGTGAATTTTCTTCCTAGTATTTGGGGAGATGTTTTTCTTCAATATGATTCTGAATCACTGGAAATCAATGACAATATGAATATTCAAGTACAAATGCAAAAAGAGGAAGTGAAGAAGCTTTTTCAATCTTCAACCAATAATAATATCTCACAAAAACTAATCATCATTGACTCATTGCAACGTTTGGGAATATCTTATCATTTCGAACGTGAAATTGATGAAGCATTAGAACAAATCCACTTTAATTTAACTATCAATAATGAAATAAGCACAAAAGAAGAACATGACCTTCACTTTCTAGGGTTAGCATTTCGCTTGCTTCGGCAAAAAGGACATCACATTTCATCAGATATATTTAAAAATTTCAAAAACAATAAAGGGAGCTTCAATGAAAAGGTTGATATACATGTTGAAGGAATGTGGAGCTTGTATGAAGCCGCGCAATTAAAGATTCGCGGAGAAGATATATTAGATGAAGCACTTGATTTCACACAACCTCATCTGGTTTCCAAAACTACTACCAATCAATTGAGTAGTTTTCTTCATGCACAAGTAACTCAATGTTTAAGGAGACCTCTGCATAAGGGAATTCCTAGGTTGGAGACAAGGTGTTACATATCTTCCTACGAACAAGATCCTTCCCATAGTAAAGTTCTTCTAAACTTTGCAAAATTAGATTTCAACATGCTACAGAAAATGCATCAAAAAGAACTTGCCAGTATCACAAAGTGGTGGAAAAAATCGGACTTCACTAAGAATGTCCCTTATGCAAGGGATAGAGTGGTTGAGGCTTACTTTTGGCCATTGGCTATGTCCTATGAGCCTAAATATGCCACTTCAAGAAAGATAGGAGGAAAATTGATCTCATGTATTTCTCTTTTAGATGATACTTATGATGCATTCGGCACGGTTGAAGAACTCGAAATCTTCACAGAGGCAATCCAAAGGTGGGATTTTAGTCTCATTCAATCCCTTCCAGAGTGCATGAAAGTAGTATTTAAAACAGTTGTAGGACTATGGGACGAAATAGAGATGACATTGGTAGAGAATGGAAAACCGAATTTCGTGCTGCCATATATCAAACATGCTTTTTATAATCTGGCACAATCCTATTTGGTTGAAACAAAATGGGGCAACGAAGGATTCATACCAACCTACGACGAATACAAAGCTAACGGACTCATATCTTCTACAATCCCTCTTTCACTAATATCATTCATTGGTCTTGGAGAATTCTCAAACAAAGAGTTACTAGATTGGCTTTCCAGTGATCCAACAATCATCAATGCTGTTGCAGCCATTGGCAGACTCGCGGACGATGTATCATCACATAAGTTCGAGCAGCAAAGAGTGCATGTTGCTTCAGCTGTTGAATGCTGCATGAAGCAATATGAAGTGTCACAAGAAGAGGCCTATAAAATCATTAACAAGGACATTGAAGGTTTTTGGATGGATTTAAATGAAGAGTGCCTCAAGTTAGAGAGTGTTCCGAGATCGGTGCTTGATTGTATTCTTAATGTGGCAAGAGTAACTGAGTTCACATATGAAAACTATGAGGATAAATACACAAATGGGGAACTGTTGAAAGATTATGTTATTCAGCTGCTTATAGATCCAATAACCATGGAGCAAACCAAGTAG 1692 0.37 MSFAAPTHAEPKITRPTVNFLPSIWGDVFLQYDSESLEINDNMNIQVQMQKEEVKKLFQSSTNNNISQKLIIIDSLQRLGISYHFEREIDEALEQIHFNLTINNEISTKEEHDLHFLGLAFRLLRQKGHHISSDIFKNFKNNKGSFNEKVDIHVEGMWSLYEAAQLKIRGEDILDEALDFTQPHLVSKTTTNQLSSFLHAQVTQCLRRPLHKGIPRLETRCYISSYEQDPSHSKVLLNFAKLDFNMLQKMHQKELASITKWWKKSDFTKNVPYARDRVVEAYFWPLAMSYEPKYATSRKIGGKLISCISLLDDTYDAFGTVEELEIFTEAIQRWDFSLIQSLPECMKVVFKTVVGLWDEIEMTLVENGKPNFVLPYIKHAFYNLAQSYLVETKWGNEGFIPTYDEYKANGLISSTIPLSLISFIGLGEFSNKELLDWLSSDPTIINAVAAIGRLADDVSSHKFEQQRVHVASAVECCMKQYEVSQEEAYKIINKDIEGFWMDLNEECLKLESVPRSVLDCILNVARVTEFTYENYEDKYTNGELLKDYVIQLLIDPITMEQTK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06741 563 FunFam Isoprene synthase, chloroplastic 64 232 - -
Vivi2g06741 563 Pfam Terpene synthase, N-terminal domain 24 206 IPR001906 GO:0010333|GO:0016829
Vivi2g06741 563 Pfam Terpene synthase family, metal binding domain 237 501 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi2g06741 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 558 IPR034741 -
Vivi2g06741 563 CDD Terpene_cyclase_plant_C1 15 556 IPR044814 GO:0010333|GO:0016102
Vivi2g06741 563 PANTHER OS04G0344100 PROTEIN-RELATED 13 556 - -
Vivi2g06741 563 Gene3D - 64 232 IPR036965 GO:0010333|GO:0016829
Vivi2g06741 563 SUPERFAMILY Terpenoid synthases 232 558 IPR008949 -
Vivi2g06741 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 22 232 IPR008930 -
Vivi2g06741 563 FunFam Isoprene synthase, chloroplastic 215 547 - -
Vivi2g06741 563 SFLD Isoprenoid Synthase Type I 234 558 - -
Vivi2g06741 563 Gene3D Farnesyl Diphosphate Synthase 22 543 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06741 Vivi-Chr2 205677522 205679710 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06741 K15803 - gmx:100781367 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06741 2 205677522 205679710 Vivi2g06741 2 205677522 205679710 ECH