Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06736 ATGTCTACTTCTCTGGAATATGATGATTTGTCACAAAAAAACAAGAAAGTTCTCGACTTCATAGAAGATGTTACTACACATGCAGATGAAATCCAAAAGAAAGTCTTGGCTGAAATTCTCTCTAAGAATGCAAATGTTGAGTACTTACAAAGACATGGTCTCAATGGCAAAACTGATAGTGAAACCTTCAAGAAACTTCTCCCTGTCATAACTTATGAAGATATTCAAAATGATATTAACCGTATCGCCAACGGTGATACTTCTCCAATCCTCACCTCAAACTCCATTTCAAGCTTTCTCACCAGCTCAGGAACATCAGGTGGTGAGAGAAAGTTGATACCAGCAACAGAAGAAGAATTTGTAAGAAGATCTTTACTAATAAGTCTGTGCATGCCAATAATTAATCAATTTGTTCCTGACCTAGATAAAGGAAAAGGAATGTACTTAATGTTTATAAAAAATGAATCTAAAACACCAGGAGGCATTAAAGCTAGTCCAGCCCTTACAACATATTACAAAAGTTCTCATTTTTTAAACAGACCTTACGATCCATACGCGAATTTCACAAGTCCAAATGAAACTGTTCTATGTCTTGACTCATATCAAAGTATGTATTCACAACTTCTATGTGGTCTTTGTCAAAACAACGAGGTCCTTCGTGTAGGTGCTATTTTTGCTTCTGGACTTATCCGCGCCATTCGGTTCCTTGAGAAAAATTGGTCACTTCTCTGCGATGATATAAGAACAGGAACAATAAATCCTCTCATCACTGATAGTTCAGTGAGAGTGGCTGTGATGAAGATTCTCAAATCTGATAAAAATCTTGCAGATTTTGTTGAATTTGAGTGCAGCAAAGGTTGTTGGCAAGGTATTATAACTAGGTTGTGGCCTAATACTAAGTATGTTGATGTTATTGTGACAGGAACAATGTCACAGTACATTCCTACTTTGGATTACTATTGTAATGGTCTTCCACTTGTTTGTAAGATGTATGCTTCCAGTGAATGTTTCTTCGGTGTTAACCTTAATCCTCTTTGTAAACCTTGTGATGTGTCTTATACCCTTATCCCTAACATGTGTTACTATGAATTCTTACCGATTAATAGAAGTACCGATTCTGTACATGAGAATGAAAAGCAAGAGTTGGTGGATCTTATTGATGTCAAGCTTGATCAAGAATATGAGCTTGTTGTTACAACTTATGCTGGACTTTATAGGTACAAAGTGGGGGACATATTGAAAGTGACTGGATTCAAGAACAATGCACCGCAATTCAGATTTGTCTGCAGAAAAAACGTTGTTCTAAGCATAGATTCAGACAAAACAAACGAAGTTGAGCTACAAAATGCGATAAAAAATGCTGTCACACATTTAGTACCATTTGAAGCAGATGTAGCAGAGTACACTAGTTATGCAGACACAAGAACAATTCCAGGACACTATGTATTGTATTGGGAATTAAACCTTAAAGACTCAACAACAATTCCACATTGTGTTTATGAAGATTGTTGTTTAACTATTGAAGAGTCACTTAACAGTGTTTATCGACAAGGTCGTGTTTCAGATAAATCGATTGGGCCGCTTGAGATTAGAATTGTCGAGGAGGGGACATTTGATAAACTTATGGATTATGCTATTAGCTCGGGATCGTCAATTAATCAATATAAGACTCCTAGGTGTGTGAAATCTGCACCTGTTTTGGAGCTTTTGGAGTCAGGAGTTATGGCAAAGTATTTTAGTCCTAAATGTCCACAATGGGCTCCTGGTCATAAGGAGTGGATTGTTAATAAAAATTGA 1797 0.3662 MSTSLEYDDLSQKNKKVLDFIEDVTTHADEIQKKVLAEILSKNANVEYLQRHGLNGKTDSETFKKLLPVITYEDIQNDINRIANGDTSPILTSNSISSFLTSSGTSGGERKLIPATEEEFVRRSLLISLCMPIINQFVPDLDKGKGMYLMFIKNESKTPGGIKASPALTTYYKSSHFLNRPYDPYANFTSPNETVLCLDSYQSMYSQLLCGLCQNNEVLRVGAIFASGLIRAIRFLEKNWSLLCDDIRTGTINPLITDSSVRVAVMKILKSDKNLADFVEFECSKGCWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYCNGLPLVCKMYASSECFFGVNLNPLCKPCDVSYTLIPNMCYYEFLPINRSTDSVHENEKQELVDLIDVKLDQEYELVVTTYAGLYRYKVGDILKVTGFKNNAPQFRFVCRKNVVLSIDSDKTNEVELQNAIKNAVTHLVPFEADVAEYTSYADTRTIPGHYVLYWELNLKDSTTIPHCVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIRIVEEGTFDKLMDYAISSGSSINQYKTPRCVKSAPVLELLESGVMAKYFSPKCPQWAPGHKEWIVNKN 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06736 598 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 13 583 IPR004993 -
Vivi2g06736 598 Pfam GH3 auxin-responsive promoter 21 563 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06736 Vivi-Chr2 205555094 205557348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06736 9 580 EF-hand Containing Proteins AT1G23160 50.086 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06736 K14487 - gmx:100797120 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06736 2 205555094 205557348 Vivi2g06736 2 205555094 205557348 ECH