Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06724 ATGGCTTCACAAAACACTCAACTCCAATTCCAAGACTCACTACCTTTGATGGCAAACAAGCTTGGTGGAGATGGACTAATAGACGAGCTTTGCAATGGATTCAATCTCTTGAAGGATTCTACTAAAGGGGTTATCACGTTTGAAAGCCTTAAGAGGAATTCATCTTTGTTTGGATTACAAGATTTAAGCGATGAGGATTTGAGAAACATGATTGTGGAAGGTGACTTTGATGGTGATGGTGCTCTTAGTCAGTTGGAGTTTTGTGTCTTGATGTTTAGACTTAGTCCTGAACTCATGGATGGGTCTAAGTTATGGTTGGAAGAAATGCTTCAACAAGAGATTAAGGATTTTTTGTAA 357 0.3866 MASQNTQLQFQDSLPLMANKLGGDGLIDELCNGFNLLKDSTKGVITFESLKRNSSLFGLQDLSDEDLRNMIVEGDFDGDGALSQLEFCVLMFRLSPELMDGSKLWLEEMLQQEIKDFL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06724 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Vivi2g06724 118 SUPERFAMILY EF-hand 4 91 IPR011992 -
Vivi2g06724 118 PANTHER CALCIUM-BINDING PROTEIN KIC 7 116 IPR044205 GO:0005509
Vivi2g06724 118 Gene3D - 8 117 - -
Vivi2g06724 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Vivi2g06724 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06724 Vivi-Chr2 205291669 205292219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06724 4 113 EF-hand Containing Proteins AT5G54490 63.063 1.99e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06724 K24345 - gmx:100500465 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06724 2 205291669 205292219 Vivi2g06724 2 205291669 205292219 ECH