Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06669 ATGGCCAACTTCCTCTCCCAGTTCCAAACCATCAAGAACTCTTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGATTTGTGGCCAACTGTCAAGCCTGCATTTGAAGCGCGGTTGCCGTTTAAACGGGCGAGTTTGAATAACAAGGCGAGGAATGCTGTATTGGTTGAGAAGTTGCCGGCTGAGTTCATATTAACTACAGATTCGAGGCTTCGGAGCCGGTTCCCTCAGGAGCAGTTGTTGTTCTGGTTTCGAGAGCCGTATGCAACTGTCGTTCTTGTTACCTGTGAGGATCTTGATGAGTTTAAAACCATCCTTAAACCACGCTTGAAATTAATTGTTCAGAATGATGAAAGGGAGTGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGACCAAGCAAACAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGATTTTAGCTCCAGAAAAAGAGAAAGATGCTGCAAATATGACATGCATTTCCCTGAAGCTAATTTTTGGGAAGATCTGGAATCAAAAATAATGGAATGCATCAGAAATACACTTGATAGGCGTGTACAATTTTATGAAGATGAGATACGGAAGCTCAGTGAACAGCGTCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTTTGAAGGAAAGTTTGGCTTTTATGTTTGAAATGGCGCACCTTCATGAAGATGCCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAAAGAGACTTTGGTGGGGTAGACCATGGTGATGATCAGGCAGCAATTATTAATCCAGGAAACAAAGCATTGACGCAGATTGTCCAAGAGGATTCTTTTAGGGAGTTCGAATTCAGACAGTATCTGTTTGCCTGTCAATCAAAGCTCTTATTCAAGCTAAATCGACCTATTGAGGTAGCATCACGAGGTTATTCGTTCATATTAAGCTTTTCAAAATCCTTGGCATTGAATGAGCGTATTCTTCCTTTTTGTATGCGTGAAGTCTGGGTGGTAACTGCTTGCTTGGCTTTAATTGAAGCAACCACTTCCAACTATAGTGATGGACTTGTGGCACCTGACGCAGAGAAGGAGTTCTTTTGTCTTCTTGGTGACCTATATTCTTTAGCCAGAGTTAAGTTCATGAGGCTAGCATATTTAATTGGGTATGGTACTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTTTGGCCTTCAGTCCCTACTGATGCATCAGCAGAGGTGCTTGAGAAAGAAAAGTTGATTCTCCAAACAACTCCTAGAATCAAGCACTTTGGTATCCAGAGGAAACCCCTGCCCCTTGAACCAACTGTGCTACTACGAGAGGCTAACAGGCGGAGGGCTTCACTTTCCGCTGGAAATGTGTTTGAAATGTTTGACAGTCGCCAGGGTCCGATGGAAGGATCAGGTTTTGATTCACCTCCCAAGATGTCACCACAAAAAGTACTCTCAAATTCGATGACACGCACTAATTCTTCTCCGGGAAACTTTGATGGCTCAATTGGCCGACCTATGAGGCTTGCTGAGATTTATATAGCTGCCGAACATGCTTTAAAGCAAACAATTTCTAATCTTGGGATGTTAAAATCATTATCATCATCTGAGGAGTTTGAGAAAAAATATCTAGAACTAACTAAAGGTGCTGCTGACAATTACCACCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCTGCTGTTGCCTTTAAACATGGACATTTTGACCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTGTATAATGGGGAAGGATGGCAGGACTTGTTAGCCGAGGTCCTTCCCATTCTAGCAGAGTGTCAAAACATTCTTAATGATCAAGCTGGCTACTTGCTATCCTGTGTGCGACTACTTTCTCTTGAAGATGGATTATTTTTGACGAAGGAGCGTCAAGCTTTTCAAGCAGAACTGATTCGTCTTGCTCATAGTGAAATGAAAGACCCTGTACCTCTTGATGTATCATCCTTAATTACATTTTCTGGAAATCCTGGTCCTCCATTAGAGTTATGCGACAGGGATCCTGGTATCCTTTCAGTAACTGTCTGTAGTGGTTTTCCAGATGATATAACTCTTGACTCAATCAGTCTTACATTAATGGCAACATATAATGCAGACGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGACGGAATACTATTACCTTGGATCTACCTCCTCAGAAACCAGGATCATATGTTCTTGGAGTTCTTACTGGGCAAATTGGGCAGTTGAGGTTTAGATCTCATGGTGTTTCAAAAGTTGGTCCTGCAGAGAGTGATGATGTTATGAGTTATGAAAAGCCAGCTAAACCTATTTTGAAGGTTTCCAAACCTAGAGCACTTGTGGATCTTGATGCTGCTGTTTCATCTGCTTTATTAATAAATGAACATCAATGGGTTGGTATTTTAGTTCGACCCTTAAATTACTCCCTCAAGGCTGCTGTCTTGCATATTGATACTGGTCCAGGATTGGAGATTGAAGATACAAACATAGTTGAGATGGAAAGCTATGCTGGTGTATCTGACAATGATGAGGACGTGGTGCAGAAAGATGGTGCTCAAATAGAATCTTTGGATTCTGAGAAAAAGTTTGAACGATCAACTCTTCGTGAGGGTAAAATAGTGTTTCCGAATTGGGCAAGCGACACTCCTTCTATACTCTGGGTTCTAGTTCGTGCCATCAGTGACACACTCAACAGAGGCTCATCTTCAGTCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTAAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACACATCCTCTCTATGTGAGGACACATGTTACTGATAAATGCAATGATGGTACCTTGCTTCTGCAGGTAATACTTCACTCTGAAATAAAGGCTACATTGACCATATACGATGCTTGGCTTGATCTTCAAAACGGATTTGTTCATTCTGGACAAACTCAGGGTAGACCTACTTCAAGCTTCTTCCCACTAATCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTTCCTTGACAAGACAAATGCAGAAGAAGACATAGAGAAACCAGAAAGCATATTAAATATTAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCATCCTCCTTTTATAAATGAATCTACTGGAGTTGATGGTGGTAGACAGGAGCTGATCTTCAAGAGTGTAATTGTTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCTGAGAGTTGGACAGCTAATTAAGATGCAATGGAGGGTGGAAAGGTTGAAGGATTTGAATGAGAAAGAAGTTTCTGCACAGAATGACGAGGTGCTGTATGAGGTAAATGCGAATTCTGGAAATTGGATGATTGCTGGAAGGAAAAGAGGGCATGTATCTCTCTCCAAAAATCAAGGTGCAAGGATAATTATCACTGTATTATGCATGCCACTAGTTGCTGGTTATGTGCGTCCTCCTCTACTCGGGTTGCCAGAAATTGACGAGGCAAATATAAGGTGCAAACCTTCTGGGCCACATCTAGTTTGTGTTTTGCCACCAACACTCAGCTCATCCTTCTGCATTCCAGTTAATTCATGA 3774 0.4168 MANFLSQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEARLPFKRASLNNKARNAVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSKAHPANDQANKMAKKVYAKLEVDFSSRKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVNMTGKQRDFGGVDHGDDQAAIINPGNKALTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEVASRGYSFILSFSKSLALNERILPFCMREVWVVTACLALIEATTSNYSDGLVAPDAEKEFFCLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKPAVWPSVPTDASAEVLEKEKLILQTTPRIKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVFEMFDSRQGPMEGSGFDSPPKMSPQKVLSNSMTRTNSSPGNFDGSIGRPMRLAEIYIAAEHALKQTISNLGMLKSLSSSEEFEKKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYNGEGWQDLLAEVLPILAECQNILNDQAGYLLSCVRLLSLEDGLFLTKERQAFQAELIRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVCSGFPDDITLDSISLTLMATYNADEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHGVSKVGPAESDDVMSYEKPAKPILKVSKPRALVDLDAAVSSALLINEHQWVGILVRPLNYSLKAAVLHIDTGPGLEIEDTNIVEMESYAGVSDNDEDVVQKDGAQIESLDSEKKFERSTLREGKIVFPNWASDTPSILWVLVRAISDTLNRGSSSVTTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTHPLYVRTHVTDKCNDGTLLLQVILHSEIKATLTIYDAWLDLQNGFVHSGQTQGRPTSSFFPLIISPTSKAGILFSIFLDKTNAEEDIEKPESILNIKYGISGDRTIGAHPPFINESTGVDGGRQELIFKSVIVLQRPVLDPCLAVGFLPLPSDGLRVGQLIKMQWRVERLKDLNEKEVSAQNDEVLYEVNANSGNWMIAGRKRGHVSLSKNQGARIIITVLCMPLVAGYVRPPLLGLPEIDEANIRCKPSGPHLVCVLPPTLSSSFCIPVNS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06669 1257 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 8 1254 IPR045126 GO:0048193|GO:1990071
Vivi2g06669 1257 MobiDBLite consensus disorder prediction 504 524 - -
Vivi2g06669 1257 MobiDBLite consensus disorder prediction 492 525 - -
Vivi2g06669 1257 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1139 1216 IPR022233 -
Vivi2g06669 1257 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06669 Vivi-Chr2 204147325 204161831 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06669 K20307 - gmx:100787264 2232.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06669 2 204147325 204161831 Vivi2g06669 2 204147325 204161831 ECH