Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06601 ATGAGGGCTTCTTTGGGTGCTGTAATTGCGAGGTACCCATCAAGCGATGGAACTATCCACATGGGTGGAAATGGGATCATAAAGCACAACAGAAAATGCAGAGACATAGCTCTTCTTGTCATCTTCATTGCATTCTGGGTTGCCATGATTGTTAACTCTAGCTTTGCTTTCAACAAAGGAAACCCTTTAAGGCTTACTTTTGGGCTAGACTACAAAGGAAATGTGTGTGGGGACAAGCATGCAGGACTTCATGAGTTGGAGCTCAAATACTGGCTAAACCCTAATCAGGTTTATCAAAGTGGATTAAAGGATAGTCAGTTTAAACTTGCCGATGCTCGCAGTATATGCTTGTTGGACTGTCCTATTCCTTCTGAAGAGTCACTTACTTGGGTTTGTGATTATCCTGAAGGAGATATTCGTGTTTCAATGAATGATTGGATTGATATGAACTACGATTATTATGAGTTGCTCACGCCGGAAATGAAAAACTCGTCTGTTCAACTTCAAGGGCCTTGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTCATTGCTAGAGCATCAAATGTGTCTTTAACGCATTGGAAGCAGAAGGGTGGAGTTAGCATCAATGAAGATATTGTCATTGATAAGTCCATTCACAAGTATATCAATTCTCATTCAGCTATCTTAAAGAGATACATGGCTGACATAGGCAAGACTTGGCCTGTGCTGATTGTATGTGGTGGGATTTTACCTTTGTTTCTCTCTGTGATTTGGCTGCTGATGATCCGGCATTTTGTTTCTGCAATGCCTTGGATAACGGTGATTTTCTTTGATCTTCTAATAGTATCAGCTACAATGTTCTACTACCTAAAAGTTGGATGGATAGGAAATGACACTATAACACCAATCATCGGGGAGCATGATCCTTACATTCATATATATGGAAAGGAGCTGACTCATCTACGCGTTATCACTGTCCTCATGACTTTTATAATGGTTGTTTCCATTCTTACATCAATCGCTATTGTTCGGCGCATCCTTATGGCAACTTCTGTCCTTAAGGTTGCAGCAAAAGTGATAGGAGAAGTTCAAGCACTTATTGTTTTCCCAATCATACCATACGGTATCCTTGCAGTGTTCTACATGTTATGGATTTCGGTTTTTCTCCATTTATTCAGCTCGGGTCAGGTTGTTCAGAATGACTGCCACGCTAACTGCTGTTCTTATAACCTCATAGAAAAGAGGGTAATCTGCGATCGTTGTTGTGGATATAGCATCCATTACACGCCACATATTGGAGCTGCTATCCTCTTTCATCTGTTTGGTTGTTATTGGGTTACACAATTTCTCATATCATGCTCATCAACGGTGATTGCCGGATCCGTCGCCTCTTATTATTGGGGCCGTGGTGAAGCATCACCAGATATTCCTTTTATTTCCGTCTTTTCCTCCATGAAGAGGCTTACTCGTTACAGTCTCGGTTCTCTGGCTCTTGGCTCTTTGACTGTTTCATTTGTAGAATCAATCCGCTTCCTGCTCGAATCTATTCGCCGCAAACTGAAAGTCTCCAGTCATGTGCCCGACAACTGGTTCGGGAAGGCTGCATACCAGTCATCTCAATTTTTTCTTATGTGTATTGAATGGACCATCAAATCATTCAACCGAAATGCCTATATCATGATTGCTATAACCGGTAAAAATTTCTTTAGTGCTTCATCTATTGCAACGAATTTGATTAAGAATAACATCTTACGGATTGGACGTGTTAATGTGATCGGAGACGTTATCTTATTCCTCGGAAAACTATGTGTCAGCCTCTCAAGTGCTGTTTTCGCTTTCCTCATGTTAGACACTCACAAATACAAATCTGCACATAACAAGATTTCATCTCCATTCTTTCCTGTCATGGTTTGCTGGGCTCTTGGATATATCGTAGCGACCCTTTTCTTTGGAGTTATCGAAATGTCGATCGACACTATCATTCTCTCATTCTGTCAGGATTCTGAAGAGCATGGAACAGCACAATATGCTCCTCCCCTTCTCATTGAAACTCTGAATGATCAAAATGAGATGCAAAGACTCGCAGAAGGATCTCGTTAA 2100 0.4095 MRASLGAVIARYPSSDGTIHMGGNGIIKHNRKCRDIALLVIFIAFWVAMIVNSSFAFNKGNPLRLTFGLDYKGNVCGDKHAGLHELELKYWLNPNQVYQSGLKDSQFKLADARSICLLDCPIPSEESLTWVCDYPEGDIRVSMNDWIDMNYDYYELLTPEMKNSSVQLQGPCYPVIFPSVNVYWSCQFIARASNVSLTHWKQKGGVSINEDIVIDKSIHKYINSHSAILKRYMADIGKTWPVLIVCGGILPLFLSVIWLLMIRHFVSAMPWITVIFFDLLIVSATMFYYLKVGWIGNDTITPIIGEHDPYIHIYGKELTHLRVITVLMTFIMVVSILTSIAIVRRILMATSVLKVAAKVIGEVQALIVFPIIPYGILAVFYMLWISVFLHLFSSGQVVQNDCHANCCSYNLIEKRVICDRCCGYSIHYTPHIGAAILFHLFGCYWVTQFLISCSSTVIAGSVASYYWGRGEASPDIPFISVFSSMKRLTRYSLGSLALGSLTVSFVESIRFLLESIRRKLKVSSHVPDNWFGKAAYQSSQFFLMCIEWTIKSFNRNAYIMIAITGKNFFSASSIATNLIKNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYKSAHNKISSPFFPVMVCWALGYIVATLFFGVIEMSIDTIILSFCQDSEEHGTAQYAPPLLIETLNDQNEMQRLAEGSR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06601 699 Pfam Plasma-membrane choline transporter 327 669 IPR007603 GO:0022857|GO:0055085
Vivi2g06601 699 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 23 693 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06601 Vivi-Chr2 202479860 202483562 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06601 K15377 - gmx:100779959 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06601 2 202479860 202483562 Vivi2g06601 2 202479860 202483562 ECH