Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06592 ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTACCAAACTCGCCCTGATTGCACCGATGTGCCCATTTCTCGATTTAAGATCAAGCCTGGTAAGACACTAAGTCCGAGAAAATGGCATGCTGCGTTTTCGCAAGAAGGATATCTGGATATCGGCAAGACTTTGAGACGAATCTACCGAGGGGGAGTCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTACTTGGTTGCTACGACCCGAAGAGTACATTTGACGAAAGAGATCAAATAAGACAGCGCCGAAGGAGGCAATATGCTACATGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTATCACATCACCTGTAATTACCGATGATGGCCAGCCGATTCCAGATCCATTGGTTTTGCCAGAAACCAACACAGCCAATGGATTAACTGTACTTCCTCAAGATGATAATAGGCTTTCAAGTATAAATTCTGCAAATAATTTAGAAAATGTGACAGACAAGAAACTGATCCAGTGGATGTTAACTCTCCATCAAATCGGTCTTGATGTGGTTCGCACTGATAGGACAATGGTTTTTTATGAGAAGCAAGAAAACTTGTCAAAGCTATGGGATATTCTTGTTGTTTATGCTTGGATAGATAAAGAAGTTGGGTACGGTCAAGGAATGAGTGACCTATGCTCCCCAATGATAATTCTTCTTGATGACGAAGCAGACGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTCGAGGAAATTTCAGATGCACTGGTCGCACTCTTGGGGTGGAGGCTCAACTTAGTAATTTGGCTTCAATTACTCAAGTTATTGATCCAAAACTTCATAAACATATAGAACATATTGGTGGAGGTGACTATGTATTTGCTTTTCGGATGCTAATGGTTCAGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTATCTATGGGAGATGATGTGGGCTCTAGAATATGATCCTCACATGTTCTTGATGTATGAAGAAGCTCAAACAGCTTCAGAAAAAGCTGCGGGCATCAAAGGAAAAGCAAAGTCAATCCGACAATGTGGAAAATATGAGAGAGAAAATTTGAAAAATGGAGCAAAGAATACCGATACTCCTCTTCCTATATCAGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAAAGTACAACACTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGATATTGAATGACACAACAGGAAATCTAGATGCCAAAAAGGCTTGTATCGAGGCTATGAAGCTTCACAAAAAATATTTGAAAAAGGCCAAGAAAGCTTAG 1329 0.4086 MWRDPGVSADSFYQTRPDCTDVPISRFKIKPGKTLSPRKWHAAFSQEGYLDIGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRQRRRRQYATWKEECRQLFPLVGSGRFITSPVITDDGQPIPDPLVLPETNTANGLTVLPQDDNRLSSINSANNLENVTDKKLIQWMLTLHQIGLDVVRTDRTMVFYEKQENLSKLWDILVVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVIDPKLHKHIEHIGGGDYVFAFRMLMVQFRREFSFCDSLYLWEMMWALEYDPHMFLMYEEAQTASEKAAGIKGKAKSIRQCGKYERENLKNGAKNTDTPLPISVFLVASVLKDKSTTLLHEARGLDDVVKILNDTTGNLDAKKACIEAMKLHKKYLKKAKKA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06592 442 Gene3D - 266 442 - -
Vivi2g06592 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 435 IPR035969 -
Vivi2g06592 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 289 IPR035969 -
Vivi2g06592 442 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 34 413 - -
Vivi2g06592 442 SMART tbc_4 60 352 IPR000195 -
Vivi2g06592 442 Pfam Rab-GTPase-TBC domain 164 335 IPR000195 -
Vivi2g06592 442 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 160 259 - -
Vivi2g06592 442 FunFam TBC1 domain family member 15-like 161 259 - -
Vivi2g06592 442 ProSiteProfiles TBC/rab GAP domain profile. 63 329 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06592 Vivi-Chr2 202060813 202064680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06592 - - aprc:113854580 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06592 2 202060813 202064680 Vivi2g06592 2 202060813 202064680 ECH