Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06589 ATGATTACTGCAGGCAGAATCAAATCCGTCGATTTCTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCTGGAGCAGGGTTATCAATAGTAGCAGCTCTCACCATGGTGTTTTTATTTGGAATGGAACTTAGTGAGTATTTATCTGTCAGCACCTCTACATCCGTGATCATTGACAAGAGTTCTGATGGGGACTTTTTACGTATTGATTTCAATTTCAGTTTTCCTGCACTTTCATGTGAGTTTGCATCGGTCGATGTGAGTGATGTACTGGGAACAAGCAGGCTGAATCTGACAAAAACAGTTCGCAAATTTTCTATTGATTCAAATTTAACACCCACCACTGGGTCTGAATTTCATTCTAGCCCAGCTGCTAATGTCATTAAGCATGATGAAAAAGTGGATGAAGAATCTGTTGAAGGTGCTTTTGTATTCACATCAGAAAATTTTGATAAATATGCTCATCAATTTCCAATTACAGCTGTAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCCTGAAACCTTCATGGGAGAAGGCAGCTAAAATATTAAGAGAGAGATATGATCCGGAAATGGATGGTCGAATACTTTTGGGGAAGGTAGATTGCACTCAAGAAGGAGACTTGTGCCGGAGGCATCACATACAAGGGTATCCATCCATTCGTATCTTTCGTAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAACATGAGTCATATTATGGAGATCGCGATACAGATACCCTTGTTAAGACAATGGAGACTGTAGTGGCATCTCTCCCTTCACAGAAGCTTGCTTTGGAGGATAAATTAAATGTTACAGAGAATGCAAAAAGACCAGCACCATCGGCTGGGGGATGTAGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCAGGAAGCTTGTTCGTATCAGCAAGATCTGATAGCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATACACCATTTATCTTTTGGAAGGAAATTGTCACCTAGGGTTATGAATGATGTCAAGCGCTTGATACCTTATGTTGGTAACAGCCATGACAGACTGAATGGTCTGTCATTCATCAATACACATGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTCAAAACAGAGGTCATTACTAAAAAAGACTATCAATTAGTTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCACACAGTTTACATATTCCTGTTGCGAGGTTCCATCTTGAACTTTCCCCCATGCAGGTCTTGATAACTGAACATCAGAAGTCTTTTTCACATTTTATTACAAACGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTGTGGAATCAATTTTTCACAACACTGTTAGGATAATGAGAAAAATTGAGCTGGGCAAGAATTTTTGA 1440 0.3986 MITAGRIKSVDFYRKIPRDLTEASLSGAGLSIVAALTMVFLFGMELSEYLSVSTSTSVIIDKSSDGDFLRIDFNFSFPALSCEFASVDVSDVLGTSRLNLTKTVRKFSIDSNLTPTTGSEFHSSPAANVIKHDEKVDEESVEGAFVFTSENFDKYAHQFPITAVNFYAPWCYWSQRLKPSWEKAAKILRERYDPEMDGRILLGKVDCTQEGDLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTDTLVKTMETVVASLPSQKLALEDKLNVTENAKRPAPSAGGCRIEGYVRVKKVPGSLFVSARSDSHSFDASQMNMSHVIHHLSFGRKLSPRVMNDVKRLIPYVGNSHDRLNGLSFINTHDLGANVTMEHYLQIVKTEVITKKDYQLVEEYEYTAHSSVAHSLHIPVARFHLELSPMQVLITEHQKSFSHFITNVCAIIGGVFTVAGIVESIFHNTVRIMRKIELGKNF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06589 479 SUPERFAMILY Thioredoxin-like 145 260 IPR036249 -
Vivi2g06589 479 CDD PDI_a_family 146 259 - -
Vivi2g06589 479 ProSiteProfiles Thioredoxin domain profile. 127 264 IPR013766 -
Vivi2g06589 479 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 6 478 IPR045888 -
Vivi2g06589 479 Pfam Endoplasmic reticulum vesicle transporter 288 459 IPR012936 -
Vivi2g06589 479 Pfam Thioredoxin 146 244 IPR013766 -
Vivi2g06589 479 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 96 IPR039542 -
Vivi2g06589 479 Gene3D Glutaredoxin 130 286 - -
Vivi2g06589 479 FunFam Protein disulfide-isomerase 5-4 132 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06589 Vivi-Chr2 201993864 202002399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06589 - - gmx:100806869 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06589 2 201993864 202002399 Vivi2g06589 2 201993864 202002399 ECH