Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06338 ATGAAGCTTTTTCATGTTATCACAGCACTATTTTTTGCATTAACTCTTGCTAGAATTGACCCTTCTGCATGCCAAATTGTAAAGGGCAAGGTCACTTGCACTGATTGCACTCAGGACTATGATTTCTCAGGGATTAAGGTCTCTGTGAAGTGTGAAGCTATGAAAAACCTGGCTGTGGCAACTACAGAAAATGATGGCTCCTTCATGGTTGATCTTTCCACATTCCATACAAAACCTGCTTCTGATAATTGCCATGCAAAACTTCTTGGTGGACCAAGTAATCTCTATGCTTCAAGGAAAAACCAATTCTCACAAATTGTGAAGGACAAAGAGGAAAACAGCTACACAACTTCCACTCCTCTTAGTTTCTTCACTTCTTGCCCCAAAAACAAAGTATGCAAAGATGAGAATAATCAATTTGGCTCATCCAAAACCTATAATTTTCCTTTGCCTTCACAGTGGGGTTTGGCACCAAGTAGTTTTTATCTTCCTTTCTTCCCAATCATTGGAATACCATGA 519 0.3931 MKLFHVITALFFALTLARIDPSACQIVKGKVTCTDCTQDYDFSGIKVSVKCEAMKNLAVATTENDGSFMVDLSTFHTKPASDNCHAKLLGGPSNLYASRKNQFSQIVKDKEENSYTTSTPLSFFTSCPKNKVCKDENNQFGSSKTYNFPLPSQWGLAPSSFYLPFFPIIGIP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06338 172 Pfam Pollen protein Ole e 1 like 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06338 Vivi-Chr2 198592542 198593342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06338 - - gmx:100306432 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06338 2 198592542 198593342 Vivi2g06338 2 198592542 198593342 ECH
Vivi2g06338 2 198592542 198593342 Vivi5g02151 5 89612687 89613851 PCT