Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06214 ATGGGTAGTACCACTGCATCCTCTGGTGAGTTAGAGATTGAAACTGATAGTGATTTTGAAGTTCATGTGTTCTCTTCATCATCTGAGTTACTAGAAAAGCTTCATCAAACATGGAGTTCAGTGGAGAAACAACCATATCCAGCTATGTATTCTAGTATATATGGAGGTATCATACTTGATCCAGCAATGATGGTAATCCCCATAGATGATCACATGGTACATAGAGGCCATGGTGTGTTTGATACTGCTATTATTTTACAAGGATATCTCTATGAGTTGGATGTTCACCTTGATCGTTTCTTGAGATCGGCTTCCAAAGCAAAGATATCCTCGCCCTTTTCGCGATCAACTATTCGAAGCATTCTAATCCGACTAACGGCAGTATCAAAATGCAAGAAAGGAACATTAAGATACTGGTTAAGTGCAGGTCCTGGTGATTTCTCGCTGTCATCATCAGGGTGTCCAAAATCTGCATTCTATGCAGTAGTCATTGACCATGATTTTTCTCAGTGCAAAGAAGGTGTCAAAGTGATTACTTCCAATGTGCCAATGAAGGCACCATCCTTTGCCACAATGAAAAACGTGAACTATCTTCCTAATGTGCTTTCAGTATTGGAAGCTGAAGAGAAAGGAGCGTTTAGTTCTATATGGATTGATGAGGTTGGTTATATCGCTGAAGGACCGAATGTGAATGTTGCTTTCGTAACTCGAGAAAAGGAACTTGTTATGCCTTGTTTTGATAATATATTATCTGGTTGCACTGCTAAGAGGCTTCTTGAACTCGCGCCAAAGTTGGTTGATCAAGGTGTTCTGAAAAGTGTAACTACTAAAAATCTGACTGTTGAAGAAGCTAAAGGTGCTGCTGAAATGATGTATGTAGGTAGCACACTTCCTGTGCTGCCTATCATCATGTGGGATGATCAGCCAATTGGTGATGGTAAGGTTGGAGAATTAACGATGTTAGTTTCAGATTTGCTATGGGATGATATGGTAGCTGGCCCTGACACACAGAGACTACTTGTTCCTTATGTTGAGTGA 1038 0.4046 MGSTTASSGELEIETDSDFEVHVFSSSSELLEKLHQTWSSVEKQPYPAMYSSIYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILQGYLYELDVHLDRFLRSASKAKISSPFSRSTIRSILIRLTAVSKCKKGTLRYWLSAGPGDFSLSSSGCPKSAFYAVVIDHDFSQCKEGVKVITSNVPMKAPSFATMKNVNYLPNVLSVLEAEEKGAFSSIWIDEVGYIAEGPNVNVAFVTREKELVMPCFDNILSGCTAKRLLELAPKLVDQGVLKSVTTKNLTVEEAKGAAEMMYVGSTLPVLPIIMWDDQPIGDGKVGELTMLVSDLLWDDMVAGPDTQRLLVPYVE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06214 345 FunFam D-amino-acid transaminase, chloroplastic 26 164 - -
Vivi2g06214 345 Gene3D - 17 164 IPR043131 -
Vivi2g06214 345 PANTHER AMINO-ACID AMINOTRANSFERASE 27 334 - -
Vivi2g06214 345 Gene3D - 166 333 IPR043132 -
Vivi2g06214 345 Pfam Amino-transferase class IV 78 302 IPR001544 GO:0003824
Vivi2g06214 345 FunFam D-alanine aminotransferase 166 333 - -
Vivi2g06214 345 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 54 330 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06214 Vivi-Chr2 196574468 196576434 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06214 K18482 - gmx:100798871 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06214 2 196574468 196576434 Vivi2g06214 2 196574468 196576434 ECH