Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06113 ATGGCCTCATGTCACATAAGATTCCACCCTCACACACTTGTTTCTACAAACTTCACTCCAAAACTCAAACTCAACCATAACCGATTTCTCTTCTCACCTCCACACTCTTCTTCTTCCACCACCATCACCGCCATGGCTTCAAATGCTCGTAAAGTCTTAGTCCCGATCGCCGACGGCACCGAGCCTATGGAAGCCGTCATCACCATCGACGTCCTCCGTCGATCCGGAGCTGACGTCACCGTCGCCTCAGCCGCTAACAGTCTCTCCGTTCAAGCTCTCCACGGTGTTAAGATAATCGCCGACGCATCTGTTTCCGATGTTGCCAACACTGCTTTCGACCTTGTCGCTCTTCCTGGAGGGGTTCCGGGGGTGGACAATCTTCGTGACTCTGCAGTGTTGGAAGGGCTTGTAAAGAAGCATGTTGAGGATGGAAAGCTTTATGCTGCGGTGTGTGCTGCTCCTGCAGTGGTACTTGGACCATGGGGTTTACTGAAAGGATTGAAGGCAACTTGTCATCCTTCGTTCACGGAAAAATTGGCATCTTATACCACTTCTGTTGAGTCAAGGGTACAGCTGGATGGAAAAGTTGTGACCAGTCGTGCACCTGGTACCACCATGGAGTTTGCCGTGGCAATAGTTGAGCAATTGTTTGGAAAGGAGAAAGCTGATGAAGTTGCAGGCCCATTGCTTATGCGTTCTAATCATAGTGATGAGCATACTTTTTTGGAGCTAAATCCAGTGGAGTGGACATTTGACAATCCACCCAAGATTCTTGTACCAATCGCTAATGGTACAGAAGAAATGGAAGCTGTGATCATTATTGATATCCTGCGACGAGCAAAGGCAAATGTTGTTGTTGCTTCTGTTGAGGACAGACTTGAAGTCGCGGCATCACGTCAAGTTAAACTGGAGGCAAACATACTCCTTGATGAAGCAGCTAAACTTTCATATGACCTGATTGTGTTGCCAGGTGGACTCGGTGGTGCCCAAGCTTTTGCAAACTCGGAAACCTTGGTGAATTTGTTGAAAAAACAACGAGAATCAAACAGATATTATGGAGCAATTTGTGCATCCCCAGCTTTAGTTTTGGAGCCCCATGGTTTGCTAAAGGGTAAAAAGGCTACTTCCTTTCCTGCCTTGTCTAACAAGTTATCAGATCAGAGTGAAGTAGAAAACAGGGTTGTCGTTGACGGCAACCTTATTACCAGCAGAGGCCCAGGAACCACCATCGAGTTTGCATTAGTTATAGTGGAGAAGCTGTTTGGACGCAAATTAGCTCTAGAACTCGCAAATACAACAGTGTTCACAAGCTCATAA 1317 0.4692 MASCHIRFHPHTLVSTNFTPKLKLNHNRFLFSPPHSSSSTTITAMASNARKVLVPIADGTEPMEAVITIDVLRRSGADVTVASAANSLSVQALHGVKIIADASVSDVANTAFDLVALPGGVPGVDNLRDSAVLEGLVKKHVEDGKLYAAVCAAPAVVLGPWGLLKGLKATCHPSFTEKLASYTTSVESRVQLDGKVVTSRAPGTTMEFAVAIVEQLFGKEKADEVAGPLLMRSNHSDEHTFLELNPVEWTFDNPPKILVPIANGTEEMEAVIIIDILRRAKANVVVASVEDRLEVAASRQVKLEANILLDEAAKLSYDLIVLPGGLGGAQAFANSETLVNLLKKQRESNRYYGAICASPALVLEPHGLLKGKKATSFPALSNKLSDQSEVENRVVVDGNLITSRGPGTTIEFALVIVEKLFGRKLALELANTTVFTSS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06113 438 SUPERFAMILY Class I glutamine amidotransferase-like 254 435 IPR029062 -
Vivi2g06113 438 NCBIfam DJ-1 family protein 256 430 IPR006287 -
Vivi2g06113 438 NCBIfam DJ-1 family protein 51 227 IPR006287 -
Vivi2g06113 438 Pfam DJ-1/PfpI family 256 418 IPR002818 -
Vivi2g06113 438 Pfam DJ-1/PfpI family 50 215 IPR002818 -
Vivi2g06113 438 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 50 229 - -
Vivi2g06113 438 SUPERFAMILY Class I glutamine amidotransferase-like 50 233 IPR029062 -
Vivi2g06113 438 FunFam Protein DJ-1 homolog C 44 234 - -
Vivi2g06113 438 FunFam Protein DJ-1 homolog C 249 438 - -
Vivi2g06113 438 CDD GATase1_DJ-1 52 216 - -
Vivi2g06113 438 Gene3D - 251 438 IPR029062 -
Vivi2g06113 438 Gene3D - 43 244 IPR029062 -
Vivi2g06113 438 CDD GATase1_DJ-1 257 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06113 Vivi-Chr2 194826770 194830049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06113 K03152 - gmx:100803116 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06113 2 194826770 194830049 Vivi2g06113 2 194826770 194830049 ECH