Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06090 ATGGCTTCGTCTCAGGCAATAAGGCAGAGACGCTCTCAGCCGTCGGATCCACCGGCGCCATCGTCTTCTTACTCGAAGCTCGACAAACCTGCGAAATCGGACGGCAAAGATGAAGGATTGAAGTGGGTATTGCCGTTTGTTGCTTTGGGATTGTTAAGGTATATGAGTGCTACTTCGAATATCATCCATGATTGTGATGAGGTTTTCAATTACTGGGAGCCGCTTCATTATCTTCTCTACAAAACTGGCTTCCAAACATGGGAATATAGTTCACAATTTGCTCTTCGGTCGTATTTGTACCTTTTATTTCATGAAGTAGTGGCTCGACCAGCTTTGTGGTTGTTTGGCGATGAAAAAGTTAGAGTGTTCTATGCTGTGAGATTTTTTCTTGGTTTTCTCTCAGTTGCCACAGAGACTGTTCTTGTGGTAGCTCTTTCGAGAAAGTATGGAAAACGACTGGCTTCTTATACACTTGCTATGCTGTGCTTAACCAGCGGCTGTTTCTTTGCTAGCACTAGTTTCTTGCCAAGTTCATTTTCCATGTATGCAATCTCTCTTGCTTCGGGTTTATTTCTTCTTGATAAACATGCTGCGGCAGTTGCTGTTTCTGCTATTGGTGTGATACTCGGCTGGCCTTTCTCAATCTTGGCTTTCCTTCCGGTGACACTTTATTCTTTATATATAAAATTCAAACGGGCATTTATTGCTGGGGCTGTCACATCAGTAATTCTTCTTGCATTGTCAGCAGTTACTGACTATAAATACTATGGAAGATGGACTTCATCTGTTTTGAATCTTCTAATATACAATGTAGCTGGAGGCGGGGAAAGCCATCTTTATGGCACTGAAGGACCTCTTTTTTATCTGAAGAATGGATTTAACAATTTCAACGTTTGTTTTGTTCTTGCTATACTGTTCTTGGGATTTTTGCCTATTGTTAAGAAGAAATATGGGAGAGACCTACTGATTGTGATATCTCCTTTATACATTTGGCTGGTTTTTATGTCTCTGCAGCCACATAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTTATTTGTATTGCTGCTTCTGCTGTCATTGAGAGCTTTCCTGATCTTTTCCGTGACAAGTATGATTCATTTGACACTTCTATAACAGTGAAGGTAGCCAAATTTCTGAGGCCGGTGGTTCTGAGCATTATATTATATTCCTCTCATGCTCGTACATTTTCTCTGATTCATGGCTACTCAGCTCCTATAGAGATTTACAAGCTTTTAGAGCACCACGACGATGTAGCAAATGGTTCTGTACTTTGTGTTGGAAGTGAATGGCATCGCTACCCATCATCGTTTCTCGTCCCAGATTTTGTGGGACAAGTTCGATGGGTCGATGATGGCTTTGGAGGTCTTCTTCCCTTCCAATTTAATTCTACCCTAGGCGGAACTTCTGCAGCACCGCCATACTTTAACAACAAAAACATAGCATCAGAAAAGCAATTTCTTCATGATATCGATGAATGCACTTTCCTTGTTGAGCTGCAGCTAAAGCGACCTTACCTGACACGCGGTAGCGACATGTCAACATGGGAGACCGTTGCCGCATTACCTTATCTGGACAGGGAGCTTTCGCCAGCTTTATACAGGTCGTTTTTCATCCCTTACCTCTGGCAAGAAAAGAATGTTTTCGGCATGTATAAACTTCTCAGAAGAGTAATCCACTGA 1704 0.4184 MASSQAIRQRRSQPSDPPAPSSSYSKLDKPAKSDGKDEGLKWVLPFVALGLLRYMSATSNIIHDCDEVFNYWEPLHYLLYKTGFQTWEYSSQFALRSYLYLLFHEVVARPALWLFGDEKVRVFYAVRFFLGFLSVATETVLVVALSRKYGKRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGLFLLDKHAAAVAVSAIGVILGWPFSILAFLPVTLYSLYIKFKRAFIAGAVTSVILLALSAVTDYKYYGRWTSSVLNLLIYNVAGGGESHLYGTEGPLFYLKNGFNNFNVCFVLAILFLGFLPIVKKKYGRDLLIVISPLYIWLVFMSLQPHKEERFLYPIYPLICIAASAVIESFPDLFRDKYDSFDTSITVKVAKFLRPVVLSIILYSSHARTFSLIHGYSAPIEIYKLLEHHDDVANGSVLCVGSEWHRYPSSFLVPDFVGQVRWVDDGFGGLLPFQFNSTLGGTSAAPPYFNNKNIASEKQFLHDIDECTFLVELQLKRPYLTRGSDMSTWETVAALPYLDRELSPALYRSFFIPYLWQEKNVFGMYKLLRRVIH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06090 567 Pfam Alg9-like mannosyltransferase family 46 448 IPR005599 GO:0016757
Vivi2g06090 567 MobiDBLite consensus disorder prediction 1 28 - -
Vivi2g06090 567 MobiDBLite consensus disorder prediction 1 35 - -
Vivi2g06090 567 PANTHER GLYCOSYLTRANSFERASE 46 549 IPR005599 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06090 Vivi-Chr2 194013746 194018910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06090 28 565 Glycosyltransferase AT1G16900 74.122 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06090 K03846 - gmx:100805094 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06090 2 194013746 194018910 Vivi2g06090 2 194013746 194018910 ECH