Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06088 ATGTCTCTTCCATTTCTCACTTTATTACTCTTATCATTCTCCACATTCCTAGCTCAAGCCATAGTTCCACAAAATGAAACCTTCAAATTCGTAAACTCAGGTGAACTAGGCCCGTTCATAGTAGAATATGGAGCTGACTACAGAATGATAAGCATATTCAATGCACCATTCCAAGTTGGTTTTTACAACACTACACCAAATGCTTACACTCTAGCCCTCCGAATCGGCCTCCAACGATCCGAGCAACTTTTCCGGTGGGTTTGGGAGGCTAACCGAGGCAACCCGGTCGACGAAAACGCAACATTTTCATTAAATACTAATGGAAATCTTGAACTAGCAAATTCCAATGGAAGAATTGTTTGGCAAACAAACACTTCAAATAAAGGTGTTGTTGCCTTTAGGTTACTCCCAAATGGTAACATGGTTTTAATTGATGCTAAAGGTAATTTCATTTGGCAAAGTTTTGATCATCCTACGGATACTCTTCTGGTGGATCAATATTTAAGGCCCAACGGGCCTTCGAAGCTCGTTAGCAGGCTTTCGGAGAAGGAAAACCTCGACGGGCCTTATAGTTTGGTCTTAGAGCCCAAAGGTTTGGCTTTATATTACAAAAGCAAAAACTCACCTAAACCAATTCTCTATTGGTCTTCATCTCAACAAGGGCCAATAGATAATGTTACACTCACATCTGATTCAGAGTCTTTTGAAATTAGATTTGATACATTTCTTGGTAGGCCAGTGAGTAATAGTACTATAACATATCTTAGGCTTGGAATTGATGGAAACATTAAATTTCACACATATTTCCTCGACGTTCGCTCCGGTGTTTGGCAAGTTACATACACTCTTTTTGATAGAGATTTTGATGAGAGTGAGTGTCAATTACCAGAGAGATGTGGGAAGTTTGGGCTATGTGAGGATAATCAATGTGTTGGTTGTCCATTAGAGAATGGAATATTTGGTTGGAGTAATAAGTGTAGTCCTAAGCCTATAGGGGTGTGCAAACCGAGTGAGTTTCATTACTATAAAATTGAAGGAGTTGAACATTATATGAGTAAGTACACAATTGGTGATAGAGTGAGTGAAGATGGTTGTGGAAGTAAATGTAGCAAGGATTGTAAGTGTGTTGGGTATTTTTACCATAAGGATAATTCAAGGTGTTGGATAGCTTATGATTTGCAAACTCTTACTAGAGTTGCAAATACTACACATGTGGGTTATGTTAAGGTGCCTAATAAGTTAGAAAGAATGTTTTAG 1257 0.3858 MSLPFLTLLLLSFSTFLAQAIVPQNETFKFVNSGELGPFIVEYGADYRMISIFNAPFQVGFYNTTPNAYTLALRIGLQRSEQLFRWVWEANRGNPVDENATFSLNTNGNLELANSNGRIVWQTNTSNKGVVAFRLLPNGNMVLIDAKGNFIWQSFDHPTDTLLVDQYLRPNGPSKLVSRLSEKENLDGPYSLVLEPKGLALYYKSKNSPKPILYWSSSQQGPIDNVTLTSDSESFEIRFDTFLGRPVSNSTITYLRLGIDGNIKFHTYFLDVRSGVWQVTYTLFDRDFDESECQLPERCGKFGLCEDNQCVGCPLENGIFGWSNKCSPKPIGVCKPSEFHYYKIEGVEHYMSKYTIGDRVSEDGCGSKCSKDCKCVGYFYHKDNSRCWIAYDLQTLTRVANTTHVGYVKVPNKLERMF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06088 418 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 397 - -
Vivi2g06088 418 ProSiteProfiles Bulb-type lectin domain profile. 25 156 IPR001480 -
Vivi2g06088 418 SMART blect_4 41 158 IPR001480 -
Vivi2g06088 418 Gene3D - 52 156 IPR036426 -
Vivi2g06088 418 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 218 IPR036426 -
Vivi2g06088 418 PIRSF SLG 1 417 IPR035446 -
Vivi2g06088 418 Pfam D-mannose binding lectin 87 171 IPR001480 -
Vivi2g06088 418 CDD PAN_AP_plant 334 411 - -
Vivi2g06088 418 CDD B_lectin 41 158 IPR001480 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06088 - - gmx:100804561 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06088 2 193939659 193941136 Vivi2g06088 2 193939659 193941136 ECH