Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06068 ATGCCAGCAACCACCTTCGCCCAATTCTACGTCTCCTGGTACGACCAATTCACCCGCTTAATCAACCAACTCACAACACCAAACCAAACCGACACAAACGAACTCATCCGCAAGGTCATGTCCCACCATGAAAACTACTTCAAAGCTAAATCAAAAGCTGCTGAAAAAGATCCTCTCCACGTCTTAGCATCTCCTTGGGCCTCCACTCTTGAACGATCCCTTCATTGGATCGCAGGCTGGAGACCCACCACAGCTTTTCACCTCATCTACACTGAATCATCTCTTCTCTTCGAGTCTCACATTATCGATATCCTCCATGGTCTAAGAACCGGTGACCTCGGCGATCTCTCGCCGACTCAGTTCCGTCGTGTTAGCGACTTACAATGTGACACCGTGAAGGAAGAGAATGCAATAACGGAGGAGTTATCGGAGTGGCAAGACAGTGCGAGTGATATGATGGGTTCGGAGGCTGAAGTGAATGATAAGATACAACGGCTGGTGAGCATTATAAAGAAAGCGGATGAGCTACGGCTGAGGACGCTGAGGAATGTGGTGGAGTTTCTGTCGCCGCAGCAGGCTATTGAGTTCTTGATTGCTTCAGCTGAGTTGCTCGTTGGGATACGTGGTTGGGGATTGAATCATGACCGTTCACTTCCTAGGATATGA 666 0.4895 MPATTFAQFYVSWYDQFTRLINQLTTPNQTDTNELIRKVMSHHENYFKAKSKAAEKDPLHVLASPWASTLERSLHWIAGWRPTTAFHLIYTESSLLFESHIIDILHGLRTGDLGDLSPTQFRRVSDLQCDTVKEENAITEELSEWQDSASDMMGSEAEVNDKIQRLVSIIKKADELRLRTLRNVVEFLSPQQAIEFLIASAELLVGIRGWGLNHDRSLPRI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06068 221 ProSiteProfiles DOG1 domain profile. 3 217 IPR025422 GO:0006351|GO:0043565
Vivi2g06068 221 Pfam Seed dormancy control 20 91 IPR025422 GO:0006351|GO:0043565
Vivi2g06068 221 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 5 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06068 Vivi-Chr2 193246638 193247587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06068 6 214 Calmodulin-binding Proteins AT5G65210 24.454 1.58e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06068 - - gmx:778192 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06068 2 193246638 193247587 Vivi2g06068 2 193246638 193247587 ECH