Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06060 ATGGGTTGTGCTGGATCCTCTCAGTCCAAGCCTGATGGAACTGTAAAGAAGATCCGAAAGCCTAAGCCTTGGAAGCATCCTCAGCCCATAACAATGACTCAGCTAATGCAACTGCGCGATGAGTTTTGGGATACAGCTCCTCACTATGGTGGACGGAAAGAGATTTGGGACGCTCTTCGAGCTGCTGCAGAAGCTGATCTTTCTTTGGCACAGGCAATTGTGGATAGTGCCGGGGTCATTGTCCAGAGTGCTGATTTGACAGTATGCTATGATGAAAGAGGTGCGAAGTACGAGCTACCAAAGTATGTTTTGAGTGAGCCAACTAACATGATTCGAGAAAGCTAA 345 0.4754 MGCAGSSQSKPDGTVKKIRKPKPWKHPQPITMTQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTVCYDERGAKYELPKYVLSEPTNMIRES 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06060 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 114 IPR039869 -
Vivi2g06060 114 Gene3D - 31 104 IPR038169 -
Vivi2g06060 114 Pfam Ubiquitin-binding domain 16 112 IPR032752 -
Vivi2g06060 114 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06060 Vivi-Chr2 192943138 192946295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06060 - - qsu:112023216 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06060 2 192943138 192946295 Vivi2g06060 2 192943138 192946295 ECH