Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05981 ATGCAAGCATCAATCACATTCTCTCCACTTCCACACACACTCATTAAATTCAGACCACAACCTTCCCAACCAAACCCTATTTTCCATCGAACCAAACCATCTTCTCCCATCACACTATGCAATTTCCAACCTCAACCCCCCTCAACCCCTTCCACATTAAAATCCCCCTTAATCCGCTTCTCCAACTCCGGTCCTCTTCGTTGCGGCATTTCATCGAACAGTGAGAGCGCAAATGTGGGTGAGAGGAGTTTAAGACAGTGGGTCGAGCTTACTGGTGAGGTGATATCCACGGCGTTTCCGCTATGGGTTACGATTGGGTGTGTATTGGGTTTGGTGAGACCGAGTTCATTCAATTGGGTTACTCCTAAATTGAGCATTGTGGGACTTAGTGTAATTATGCTTGGTATGGGTATGACTTTAACTCTTGATGATCTTCGTTCTGCTCTTTCTATGCCTAAAGAAGTCTTCTCTGGTTTTTTTCTTCAATATTCGGTGATGCCATTATCTGCGTTTTTTATAAGCAAACTCTTAAATCTTCCATCACATTATGCAGCTGGTTTAATATTAGTTGGGTGCTGTCCAGGAGGCACAGCTAGTAATATTGTTACATATCTTGCACGTGGAAATGTGGCGCTTTCCGTTGTAATGACAGCTGCAAGCACTCTATCAGCCGTGATCATGACTCCTTATCTGACAGCCAAACTAGCTGGTAAATATGTAGCCGTGGATGCAGCTGGCTTATTAATGTCGACATTGCAGGTTGTGCTTTTTCCTGTATTGGCTGGTGCACTTCTTAATCAGTATTTCCAACCTCTTGTTAAACTTGTATCTCCATTGATGCCACCCTTGGCTGTAGCAACTGTGGCAATTTTATGTGGAAATGCAATTTCACAGAGTTCTTCTGCAATCCTGATGTCTGGTAGACAGGTGATCCTAGCCGTCTGCCTTCTTCATGCTTCTGGTTTTTTCTTCGGATACGTTCTTGCAAGGATTCTCGGGCTAGATGTGCCATCATCGCGAACCATATCCATTGAAGTTGGCATGCAGAACTCGGTTCTCGGTGTAGTTCTGGCTGCCAAGCACTTTGGAGATCCCCTAACAACAGTACCGTGTGCTGTTTCAAGTGTGTGTCACTCAATCTTTGGTAGCATCTTGGCAGGAATGTGGAGACGTTCTGGGCCTCCTGAGATAAAGGACTGA 1200 0.4483 MQASITFSPLPHTLIKFRPQPSQPNPIFHRTKPSSPITLCNFQPQPPSTPSTLKSPLIRFSNSGPLRCGISSNSESANVGERSLRQWVELTGEVISTAFPLWVTIGCVLGLVRPSSFNWVTPKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVFSGFFLQYSVMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPYLTAKLAGKYVAVDAAGLLMSTLQVVLFPVLAGALLNQYFQPLVKLVSPLMPPLAVATVAILCGNAISQSSSAILMSGRQVILAVCLLHASGFFFGYVLARILGLDVPSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRRSGPPEIKD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05981 399 Gene3D - 84 392 IPR038770 -
Vivi2g05981 399 PANTHER SODIUM-BILE ACID COTRANSPORTER 78 392 IPR004710 -
Vivi2g05981 399 Pfam Sodium Bile acid symporter family 127 301 IPR002657 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05981 Vivi-Chr2 190925653 190929002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05981 67 399 Organic Solute Cotransporters AT1G78560 76.877 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05981 K03453 - egr:104450062 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05981 2 190925653 190929002 Vivi2g05981 2 190925653 190929002 ECH