Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05855 ATGAGGCCAGTTTGGGCTCTGAAAGTTTTAATCGTCATCGTTTTCACTTCGATTCTCTTCCGTGGCGTCTGTGGTGCTAACCACACCGTTGGCGGTGCTTCCGGCTGGGATCTCAATGTCAATATGCACGACTGGTCTTCAACCACTACCTTCAATGTCGGCGATGATCTTGTGTTTTCTTACACGCCGTTACACGATGTGGTGGAAGTAAACCAACAAGGTTACGACACGTGTACGATAGCAAACGCAATAGGCACATATAACACCGGAGAAACAGTGATCCATCTGACCTCAGAAGGAACCCGTTACTTCGTCTGTGGGAGAATGGGCCATTGCCAAATGGGCCTCAAACTCGAAGTCCGAATTCCGATCCAATCCAACAACAACGGAACCGGTGATAACCAAAACCAACCCGGCGGCGCTCGGAGAAATCCACCTCCACCTCGTTCTCCACTTCGTTTTCCTCCACCACATCATCAGTCTCCTCCTAGTCCTCGAGATGCACCTTCTGATGCACCTACTGAAGAGCCTTGTGATTGTTCCTCTGCTGGGGAGGGTCGTTGGGTCGTGTCATTGATTACACGAGTGACCGTCTTAGGTTTAATCTTCTTCTCTTCTTTGTTCTTTGTCAATTAG 636 0.4921 MRPVWALKVLIVIVFTSILFRGVCGANHTVGGASGWDLNVNMHDWSSTTTFNVGDDLVFSYTPLHDVVEVNQQGYDTCTIANAIGTYNTGETVIHLTSEGTRYFVCGRMGHCQMGLKLEVRIPIQSNNNGTGDNQNQPGGARRNPPPPRSPLRFPPPHHQSPPSPRDAPSDAPTEEPCDCSSAGEGRWVVSLITRVTVLGLIFFSSLFFVN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05855 211 PANTHER BLUE COPPER PROTEIN 26 131 IPR039391 GO:0009055
Vivi2g05855 211 FunFam Blue copper 24 128 - -
Vivi2g05855 211 MobiDBLite consensus disorder prediction 124 182 - -
Vivi2g05855 211 CDD Phytocyanin 26 122 - -
Vivi2g05855 211 MobiDBLite consensus disorder prediction 124 140 - -
Vivi2g05855 211 MobiDBLite consensus disorder prediction 141 170 - -
Vivi2g05855 211 Pfam Plastocyanin-like domain 36 115 IPR003245 GO:0009055
Vivi2g05855 211 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Vivi2g05855 211 Gene3D - 25 127 IPR008972 -
Vivi2g05855 211 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05855 Vivi-Chr2 188512015 188516462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05855 9 122 Miscellaneous Gene Families AT3G27200 38.793 1.41e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05855 - - gmx:102664120 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05855 2 188512015 188516462 Vivi2g05855 2 188512015 188516462 ECH