Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05852 ATGAGTTACCGTAACGGCGCCGCAATACTCTCAAGAGCCAACAGAATCAAATCAAAGCTTCAATCCTCCCTCGAAGCCACCGTTCTGGAGGTAGACGACGTGTCGTATCAGCACGCCGGTCACGCCGCAATGAAAGATACTTCCGATAAAGAAACTCATTTCAACTTGAAAATCGTTTCTCCCAAATTCGAAGGTCAGAGTCTTCTTAGACGACACCGTTTGGTCTATGATCTTCTCTCTGACGAGCTTCAATCTGGACTTCACGCGCTTTCTATTGTCGCCAAGACGCCGAATGAAGTGGCCAATACTACGAAATGA 318 0.4717 MSYRNGAAILSRANRIKSKLQSSLEATVLEVDDVSYQHAGHAAMKDTSDKETHFNLKIVSPKFEGQSLLRRHRLVYDLLSDELQSGLHALSIVAKTPNEVANTTK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05852 105 Gene3D - 10 103 IPR036065 -
Vivi2g05852 105 SUPERFAMILY BolA-like 11 102 IPR036065 -
Vivi2g05852 105 Pfam BolA-like protein 20 99 IPR002634 -
Vivi2g05852 105 PIRSF BolA 1 105 IPR002634 -
Vivi2g05852 105 PANTHER - 11 102 - -
Vivi2g05852 105 FunFam SufE-like protein, chloroplastic 10 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05852 Vivi-Chr2 188469696 188470263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05852 K22066 - gmx:100818493 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05852 2 188469696 188470263 Vivi2g05852 2 188469696 188470263 ECH