Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05848 ATGGCAGTAACCACCTCAACACCAGCATCTCCACCACCACCACCATCAATGGCGCAAGATCTACTCAATTCCCTTCCCAAAACCCTAAAACTCAAAACCAAACAACAAGAGCTTCTCCTCCGCGTAACGACGCTAGGTTTAATCTACATCCTCGCATTCATCACTCGTCTTTTCAGTGTTCTCCGTTACGAATCCATGATCCATGAATTCGATCCGTATTTCAACTACCGTACGACTGTTTACCTAACGGAACACGGTTTCTCCGAGTTTTGGAACTGGTTTGACTCAGAATCGTGGTATCCACTCGGTCGTATCATCGGGGGTACGCTTTATCCCGGTCTTATGCTCACCGCCGCCGCGCTTTATAAAATCCTCCATTTCCTCAGATTCGCCGTGCACATCCGTGAAGTCTGTGTTCTAACGGCGCCGTTTTTCGCTTCGAATACAGCGATTGTTGCTTACTTCTTTGGGAAAGAGGTGTGGGATTCCGGTGCTGGAATTGTCGCGGCGGCTTTGATTGCGATTTGTCCGGGATACATTTCGAGATCTGTTGCTGGATCGTATGATAATGAAGGAGTTGCGATATTCGCGTTGTTGTTGACGTTTTATTTGTTTGTGAAAGCGGTGAATACTGGATCGTTGTCATGGTCTTTGGCATCGGCGTTTGGTTATTTCTATATGGTTTCGGCTTGGGGTGGTTATGTGTTTATTATAAATTTGGTTCCACTTTATGTGTTGGTGCTGTTGGTAACTGGGAGATACTCTATGAGACTTTATGTTGCTTATAATTGCATGTATGTTTTGGGAATGTTGCTTGCCATGCAGATTAGGTTTGTTGGGTTTCAACATGTTCAGTCTGGAGAACATATGGCTTCTATGGGTGTCTTTTTCTTGCTTCAGGTGTTTTTCTTTTTGGATTGGGTGAAGCATTTGCTTGGAGATGTAAAATTGTTTCAAGCATTTTTGAGGATTACTGTAACTGGTGCAGTTAGTGTTGGTGCCATTGCCTTAGGAGTCGGCACTGCATCTGGTTACATATCACCATGGACCGGAAGGTTTTATTCCTTGCTTGATCCAACATACGCTAAGGATCACATTCCAATTATTGCTTCTGTCTCTGAACATCAGCCCACCGCTTGGTCATCCTTCATGTTTGATTTCCATATATTGTTGTTCCTTTTCCCTGCTGGGCTCTATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTACTTTGCTGGTGTTATGGTTCGATTAATTCTTGTTGCTACACCTGCTGTATGCCTCATTAGTGCTATAGCGGTTTCTGCCACTGTGAAGAATTTGACTCGGGTTGTGCGAGCAAAAAGCCAAAACTTACAAAGTGGTTCTGGTAAAGGAACTAGTGCTTCAAAAGGTTCTTCTAAGGGAGTAATTGATAACTCTCAGCCTTTCCAAAAGAACGGTGCTATTGTGTTACTTCTCGGTGCTTTTTATCTACTCAGTAGATATGCTATTCATTGTACATGGGTCACATCTGAGGCATACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCATGGCCAGAGGGTTATCTTTGATGATTATCGTGAGGCTTACTTCTGGCTTCGCCAGAACACCCCACCAGATGCCAAGGTGATGTCGTGGTGGGATTACGGTTATCAAATCACGGCCATGGGAAACAGAACAGTTATTGTTGACAATAATACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGACATAATGAGATCGCTTGATGTTGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCCTCTGATGATATTAATAAATTTCTTTGGATGGTGAGAATTGGCGGTGGAGTTTTTCCTGTTATAAAGGAACCTGATTACCTTGTCAATGGAGAGTATCGTGTTGATAAAGGAGCAGCTCCAAAGATGTTGAACTGTCTTATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAGCCACCTGGGTATGATCGAGCTAGAGGAGTTGAAATTGGAAACAAGGACATAAAGCTGGAGTATTTGGAGGAGGCGTTTACTACTCAGAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTCGTAA 2205 0.4327 MAVTTSTPASPPPPPSMAQDLLNSLPKTLKLKTKQQELLLRVTTLGLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTVYLTEHGFSEFWNWFDSESWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLSWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMASMGVFFLLQVFFFLDWVKHLLGDVKLFQAFLRITVTGAVSVGAIALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKSQNLQSGSGKGTSASKGSSKGVIDNSQPFQKNGAIVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05848 734 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 536 688 - -
Vivi2g05848 734 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 27 733 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vivi2g05848 734 Pfam Oligosaccharyl transferase STT3 subunit 44 520 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vivi2g05848 734 Gene3D - 537 687 - -
Vivi2g05848 734 MobiDBLite consensus disorder prediction 463 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05848 Vivi-Chr2 188388354 188393652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05848 9 733 Miscellaneous Gene Families AT1G34130 86.027 0.0 1277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05848 K07151 - gmx:100780916 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05848 2 188388354 188393652 Vivi2g05848 2 188388354 188393652 ECH