Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05840 ATGCATTGTGCGCCTCAACCAAAAGGTAATGATAGTCCAAAAGTTTCAGAAGCAGGAAAGAATTCCAAATCAACAACATATCAGCAACAAGACAAAGTTACATCTCTGGAAGTCACAAAACATTCTCAAGGATCTTCTGTTTCAAAGATCAACTCTGATAGTAGGTGTGCGATCCTTACATTCCTTAGTGTTGAGCCTGATGGAACCTGGAGAATTCTCGCCGTTCCAGTGCAGTGTCTCAATCACATTAACCTAGCTTCTGGAATTAATATGGATGGTCTGCAACTTCTTTTCCCTCCACCAGCTCCTCTAAACCGGTCGAAGAAAGATCAATGCAAGGGGTCTAGAGGACAGGTGCCTCTGAGTGCTTATACGGCCAAATCATATGAAAGAAGTTATAACGGTTCAAATAATGTTCGTCGTAGATGTCAAAATAAAGTAGCTAACAAAGCTTGTAAACTGAAAGAACTTCCTGCAGATTCTTGTGCGCAAAGTTCGGTAGTTAGTAGTAGCCCTAGCTTGTCACCTCATAGTTCTGCCACTGTTATTTCATCTGATAAGTGGATGAGTAACACTTACGAAGATAAGTCGTCGAAGAAAAGCTCGAGAAAAAGAGCAAGAAAGAAACAGATAAAGAACCAATCAAGTGAAAGTGGATCCAATGATAGAGAAGTTCGTTCGGAAGAATACGGGTGTGTAAGTTTGACTTCTGAAACTTGCAGCAGCAATGATGTGGATACAACTGCCCCGGAATTTTCATCTTCCGACGATAGGTTCATGAAAATTGATTGTGAAAGGAATGAGATGAATGACAAAGTCAATGTTATGGATGCACCAAAACGCTGCGACCCTCGTATCGAGGAGGCAGTAATGTCAAAAGCTGAATCAAGGAGTCAGCTACATGATAAAGAATCAAAGGATATTCAAGACGTTGAGCTATCCTGTTTTAATGATACACAAGACACTTTAGTGTTGGATTCAGTTTCGATTGGTTCAAAAAGCGATGAAAGTGTCTATGGCGCTCATATAGGAAAACAGTCCAACAAGGCAAGTTGTGGAGATGAGTATTTTCTCGGTCAAGGCTTAACGAACGGTTTTCGCAATAACTCTGAACATAACGAGGAAATAAGGAACGGCGGTCAAAATTGCGTTGTCAATGATAAGAGAGTTCAGCATAAGAGAACGATGTCCAAGAGTTCAAGTTTCAACAAATTCACAGGCATTCAAAACGGTCGAACAGGGAAGGAAAACAGTCATTCTGTATGGCAAAAGGTTCAGAAGAATAGTTCGAGTGAATGTGGTGGTGATTTGAAAAAAATAAGCACACCTTCGTCACAATTCATTTCCACTACTGACAAGGATACTTCAGCTATAAAAAACAGTAATTCTGTTGTTGCAAATGTTGTTTCAGGAGGAGAGGTTAAAAAACAAGCGAAAAGTAAAGCCGGTCGGAAATCAAAAGGGAAAACAACAGACTTGGTTATGAAAAAAGGACCCTGCAATTATTCTAGGAAGGGTTCCAATTATAACCGGACCGTGTTAAACGATAACATGAAGGGTAGTATTCAACAGAATGATTCTTCAAGTATCTCGTCTCAGGAAATTAATCATCAAGGAACGGTAATGGAGTTTCAGACCAATGGAGTTAAACAAGAATCATCTGAAATAGTTCATAATGAACAGTTTCATCCGGTGGAGTCCGATATCCAGAAAAATTCCCAGGAGCCAAAGAATGAAAGTATAGACATTCAATCTCAAGTTTCTTGTTCTGATGAGCAGTCTCAAGTTTCCTGTAATCTCTTAGATGATCAAGTTAGTCAAACATTGAAGGAAGTTTCTTCTGCTGATTACTACGTTCAAAACCACAGTTCTGGATCTTCACAATGGAAATGGATACCAGTTGGGAAAAAAGATACTGGAAGGACCAAATCTGAGTCAGAATATTCTGACGAACCAACTAGTAAAAATTTCGAATCGGAAAACACTCTCAAACCAAAAACTGATTCATTTTCTCAAAATCAGGATTCTTCACCAAATGCAGTTACATGCATTGGTCAGATCGAGGGTGAGAGTCATAAACTTGATGAGGAGATTTCAGGTACACTGGCCGAGCATAGGGACAAACATGAAGTAGCTAATCACATGATTTATGAATGTGAGAATCAATATATTTTTGAAAACGATTCGTATAGAATTGCTCAAGCTGTGAATGATACCTTCAGGGTTCAATTAGCTTGTGAAGTAGTACACAAGGCGACTGGTGGACCGGTTGCAGAGTTTGAAAGACTACTTCATTTTTGCAGTCCTGTTATTTGTCGATCACTTGATTCACTCCGTTGTCTGACGTGTTCTCAAAACTACTCTGTTGGTACCACACTGTGCCGACATGAGATACCTGAAGTATCTTTGGGGTGCTTGTGGGAGTGGTATGAGAAACATGGTAGCTATGGGTTAGAGATAAGGGCTTGGGATTATGAAAATCCGAAGACATTCGGCGGTGTCGGTCATTTTCCATTTCGTGCCTATTTTGTCCCTTCTTTATCAGCGATTCAGCTGTTTAAGAACCGTGAAAATCGATGTGTGAACAGCAATGCAAACTTTCCAAATTGTAAGGTTTCTGAAGACTCCTTCACTCCTATCAATGATGGTTCTAATCCATATACCGAGTCTAGTACTTCTGGCGATTTAGAACTTCTTTTTGAATATTTTGAATGCGAACAACCTCAACAAAGACGACCTCTATATGAAAGGATACAGGAGCTGATTAGAGGTAACGTACCGATCCAATCCAAAACTTATGGGGACACAACTAAACTGGATTCAATAAACCTGCAAGATCTTCATCCTAGATCTTGGTACTCAGTTGCATGGTATCCTATTTACCGTATACCAGATGGCAACTTTCGTGCATCTTTTCTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGTTCAAATTCTGATTCGCCAACTCTAGATTCTTGCGTAGTTTCTCCAGTTGTAGGTCTTCAAAGTTACAATGCACAGGGTGAATGCTGGTTCCAGCTGAATCATTCTGCATTGGCGGCAGAAATGATAGGCATAAACCCTTCAATCTTTCTTAAAGAGCGATTGAGAACACTTGAAGAAACAGCGTCTCTTATGGCAAGAGCGGTTGTAAACAAAGGGAACCAAGTTTGCACAAACAGACATCCAGATTATGAGTTTTTTCTGTCTAGGCGGCGATATTGA 3234 0.4004 MHCAPQPKGNDSPKVSEAGKNSKSTTYQQQDKVTSLEVTKHSQGSSVSKINSDSRCAILTFLSVEPDGTWRILAVPVQCLNHINLASGINMDGLQLLFPPPAPLNRSKKDQCKGSRGQVPLSAYTAKSYERSYNGSNNVRRRCQNKVANKACKLKELPADSCAQSSVVSSSPSLSPHSSATVISSDKWMSNTYEDKSSKKSSRKRARKKQIKNQSSESGSNDREVRSEEYGCVSLTSETCSSNDVDTTAPEFSSSDDRFMKIDCERNEMNDKVNVMDAPKRCDPRIEEAVMSKAESRSQLHDKESKDIQDVELSCFNDTQDTLVLDSVSIGSKSDESVYGAHIGKQSNKASCGDEYFLGQGLTNGFRNNSEHNEEIRNGGQNCVVNDKRVQHKRTMSKSSSFNKFTGIQNGRTGKENSHSVWQKVQKNSSSECGGDLKKISTPSSQFISTTDKDTSAIKNSNSVVANVVSGGEVKKQAKSKAGRKSKGKTTDLVMKKGPCNYSRKGSNYNRTVLNDNMKGSIQQNDSSSISSQEINHQGTVMEFQTNGVKQESSEIVHNEQFHPVESDIQKNSQEPKNESIDIQSQVSCSDEQSQVSCNLLDDQVSQTLKEVSSADYYVQNHSSGSSQWKWIPVGKKDTGRTKSESEYSDEPTSKNFESENTLKPKTDSFSQNQDSSPNAVTCIGQIEGESHKLDEEISGTLAEHRDKHEVANHMIYECENQYIFENDSYRIAQAVNDTFRVQLACEVVHKATGGPVAEFERLLHFCSPVICRSLDSLRCLTCSQNYSVGTTLCRHEIPEVSLGCLWEWYEKHGSYGLEIRAWDYENPKTFGGVGHFPFRAYFVPSLSAIQLFKNRENRCVNSNANFPNCKVSEDSFTPINDGSNPYTESSTSGDLELLFEYFECEQPQQRRPLYERIQELIRGNVPIQSKTYGDTTKLDSINLQDLHPRSWYSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRSSNSDSPTLDSCVVSPVVGLQSYNAQGECWFQLNHSALAAEMIGINPSIFLKERLRTLEETASLMARAVVNKGNQVCTNRHPDYEFFLSRRRY 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 476 510 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 655 678 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 629 678 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 396 418 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 393 418 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 1 48 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 15 48 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 636 654 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 569 588 - -
Vivi2g05840 1077 MobiDBLite consensus disorder prediction 191 228 - -
Vivi2g05840 1077 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 10 1076 - -
Vivi2g05840 1077 Pfam Protein of unknown function (DUF789) 758 1071 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05840 Vivi-Chr2 188201768 188207567 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05840 - - psat:127132538 1927.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05840 2 188201768 188207567 Vivi2g05840 2 188201768 188207567 ECH