Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05704 ATGGTTATAATAGATATACAAACCAAACTTCGTGTAGCTCTTGGCACAATGAAAGATCAAGCTTCAATTGGCAAAGCCATGATGTATAACCATCAACAACATGATGGTTTTTCCAACATAGAGATTGCAATTCTTCGTGCAACTAGTCATGGCAATAACACAATTGATGACAAATACATGCATGAAATCCTTTTCCATGTATCAAACTCAAAAGGCTCAATCCCTTTTCTCGCCGAGAGAATTTCGCGCCGTCTATGCAAAACCAAAGACAATCTTGTTGCTCTCAAGACTCTTGTTTTGATTCATAGACTTCTTAGAGGCGGAAACCGAACATTCGAACAAGATTTATGCAAAGCTCATGTTTCTGGTCATTTGCAAATCACCATAATAAGGTATGGTTGTGTTACAAAGAATTTTTATGACCCTTTGGTTAGTTTTTTACACAAGTATGCATCTTATCTTGAAGAAAGAATGAGTTGGCTCATAAACCAAGGTGGAAAACTTGAACCTATTATGTCTAAAGGGTTAGAATTTAGGAGATATGGTGAAAAGTCTTTTGATATGGCATTTAGAATATTGCCTAAATGTCAAATTCTTATTGATAAGGTTTTGGAATTTTCACCATGTGATATTTTGAGGTCAAGTCATCATCATAATCATCATAGTCATGCTCATGTTGCTATGAGCAATATTTTGAGAGAAAGTTTCCAAGTTTACATGACATTTTCTGAAGGCATTGAAGCACTTGTTAACATGTTCTTTGAGTTAGAATCATCAGCCAAAAACTTAGCTTGTGAGATACTCAAGAAAGGCTCTATTCAAAGTCAAAAGCTTCATGATTTGTATCAAACATGTAAAAAGTATGTTGAAAACAAGAATCTTGAATACCCTTTTGTTCAAATTATAAGTATGAATCATATAATGGCATTAGACAAATTTAGTTGTCAACAAAATCAAGTTGAAGCTTCAAATGTCTCTATATCAAGAAACTCAAAATTTCCTCAAATTTCAAGCCTTTTCAATAGTTCAAAGGAGATAGAGTTGGAAGTAACTTCAAAAGAAAGAAAGAAAGATGAAGAGAAAGTTGATTTAAATTTTCCAACAATTCCAACTCTTTTTTCATGGACACTAGAGACCAAAATAAGCAAAGTTTGGGTGGTGTTTGAAGATGAAGTTCCTAGTGAATCACATATTCTTCCAAGGGAATGA 1209 0.3366 MVIIDIQTKLRVALGTMKDQASIGKAMMYNHQQHDGFSNIEIAILRATSHGNNTIDDKYMHEILFHVSNSKGSIPFLAERISRRLCKTKDNLVALKTLVLIHRLLRGGNRTFEQDLCKAHVSGHLQITIIRYGCVTKNFYDPLVSFLHKYASYLEERMSWLINQGGKLEPIMSKGLEFRRYGEKSFDMAFRILPKCQILIDKVLEFSPCDILRSSHHHNHHSHAHVAMSNILRESFQVYMTFSEGIEALVNMFFELESSAKNLACEILKKGSIQSQKLHDLYQTCKKYVENKNLEYPFVQIISMNHIMALDKFSCQQNQVEASNVSISRNSKFPQISSLFNSSKEIELEVTSKERKKDEEKVDLNFPTIPTLFSWTLETKISKVWVVFEDEVPSESHILPRE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05704 402 SUPERFAMILY ENTH/VHS domain 39 159 IPR008942 -
Vivi2g05704 402 PANTHER CLATHRIN ASSEMBLY PROTEIN 11 361 IPR045192 GO:0048268|GO:0072583
Vivi2g05704 402 Pfam ANTH domain 40 314 IPR011417 GO:0005543
Vivi2g05704 402 SUPERFAMILY GAT-like domain 180 313 - -
Vivi2g05704 402 ProSiteProfiles ENTH domain profile. 32 168 IPR013809 -
Vivi2g05704 402 SMART enth_2 38 157 IPR013809 -
Vivi2g05704 402 Gene3D - 8 161 IPR008942 -
Vivi2g05704 402 CDD ANTH_N_AP180_plant 40 160 - -
Vivi2g05704 402 FunFam putative clathrin assembly protein At1g33340 14 162 - -
Vivi2g05704 402 Gene3D ANTH domain 177 332 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05704 Vivi-Chr2 185836213 185837693 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05704 - - vvo:131647654 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05704 2 185836213 185837693 Vivi2g05704 2 185836213 185837693 ECH