Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05646 ATGGCTTCCATTCCAACTTTCTCTTCTTCATCTCTCCTACTCAAACCCAACACCAACACCAACACACTCTTTCCCCATTCAAACCTCAGCAACAACTACCAATCATGCACTCTCTCTTTCACTTCTCTCTTTCCAACAAGACCCATTTCCTCAACTCGTTCAATTTCCATCGCCAACTGCCGCGCTTCCTCCGCAACGGTGCCGTTTAGTCCCCCCACTGACCCGAACCCACAATCTGGTGAACCACAGAAAACCCCAAATCCAAAGTGGTCGGCAAGGGCTATAAAAGCATATGCAATGGCAGAAGTGGAAACAATGAAGCTTAAGTTTCCTAAACTCGGGACTGAGCTTCTTCTCATGGGGATTTTGATTGAAGGAACAAGTAGAGCTGCAAAATTCTTAAGAGCTAATGGAATTACTTATTTGAAAGTGCGCGAACAAACACTAGAGATACTTGGGAGATCTGACTATTACTTCATAGCCCCCATAGATCCTTGTTTGACTGAGCCACTTCAGAAAGCCCTCGATTGGGCAATTAACGAGAAATTAAAGTCAGGTGAAGAAGGAGAAACAAATGTGACTCATTTACTTTGTGGAATTTGGTCACAAGAAGAATCGGCAGGTCGAAAGGTCTTGTCTGCTTTGGGTTTCAACGATGAAAAGGCCGAAGAAATTGCTAAAACAGCAGCTAGGGGAGATATTGATTGGAATATCAAGAATAGGAGTTTTCTGGGCATAAAGGGTTGA 747 0.4378 MASIPTFSSSSLLLKPNTNTNTLFPHSNLSNNYQSCTLSFTSLFPTRPISSTRSISIANCRASSATVPFSPPTDPNPQSGEPQKTPNPKWSARAIKAYAMAEVETMKLKFPKLGTELLLMGILIEGTSRAAKFLRANGITYLKVREQTLEILGRSDYYFIAPIDPCLTEPLQKALDWAINEKLKSGEEGETNVTHLLCGIWSQEESAGRKVLSALGFNDEKAEEIAKTAARGDIDWNIKNRSFLGIKG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05646 248 MobiDBLite consensus disorder prediction 66 89 - -
Vivi2g05646 248 SUPERFAMILY Double Clp-N motif 89 223 IPR036628 -
Vivi2g05646 248 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 30 230 IPR044217 -
Vivi2g05646 248 Pfam Clp amino terminal domain, pathogenicity island component 112 153 IPR004176 -
Vivi2g05646 248 Pfam Clp amino terminal domain, pathogenicity island component 195 224 IPR004176 -
Vivi2g05646 248 ProSiteProfiles Clp repeat (R) domain profile. 87 233 IPR004176 -
Vivi2g05646 248 Gene3D - 89 241 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05646 Vivi-Chr2 184661998 184665089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05646 - - gmx:100786582 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05646 2 184661998 184665089 Vivi2g05646 2 184661998 184665089 ECH