Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05639 ATGACCCTAACCCGAAACCAACCCACTAACCCAATTCCCCATACCCGAAACCCAAAAACCCAATCCCAATCTTCATCTTCATCTTCTTCTTCTCGAAGCGGCATGAAACTAATCGTGCCTCTTCAAGGTGTAGTTCAAGGTCGCAGTGGCTTTCTCCTCGGTATTTCAATCCCCTGTGCTCTCTTTTACTTTCTTCAACTTTACCTCAAACGACGTCGTCCTAATCCCAACCCTTCTTCACCTTCTTCATCTTCTTCTCCGACTCTTCTTCTTCCTCGCTCTTCTTCGAGGTCTAATTTATCCTCTCGCGGATCGATTTCGCGTGTTCGGCTCTCGAAACTTGCCTCCATTTTATCTAAGCCTGATGATTCTCTTTATTATCTTGGGTTGGAGAGGGTTTCGCAGGATCCTTATGATGTTTTTGTTAACCCTAATGGGATTATTCAGCTAGGGTTGTCTGATAATAAGTTGTGTTTTGATTTGATTGAGAAATGGTTGGTGAAGAATTTGGAGGGATCAATGATGGGGACTGGGGATATCAGTTTGAGTATTAATGGTATTGTGCCTTATCAACCTCATCATGGATTGAATGAATTGAAAATTGCCTTGGCAGATTTTATGCGTCAGGTTATGGGAGGATCAGTGGAATTTGACCCGTTGAATATGGTACTGACATCTGGAGCAACTCCTGCAATTGAGATACTATCCTTCTGCTTGGCAGATCAAGGAAACGCGTTCCTTGTCCCTACACCTTATTATCCAGGCTTTGACAGGGACGTAAGATGGCGTCCAGGGATAGACTTAATCCCTGTTCACTGTCGAAGTACTGACAATTTCAACCTAAACATCGCTGCTCTCGAACAAGCGTTTAGTCAAGCAAGAAAGCGAGGAGTCAAAGTTCGCGGAATTCTCATCTCCAACCCTTCAAATCCTGTTGGCAATATTCTTACACGAGATATGCTTTTCAGTCTTCTAGACTTTGCCGAAGATAAAAACATTCATATCATCGCTGATGAAGTATTTGCAGGCTCCACATACGGAAGTGAGGAATTTGTGAGTATAGCCGAAGTTCTTGATTCCGAGTACATAGATAAAAGCCGTGTTCATATAATATACAGCCTGTCAAAAGACCTCTCAATTGCCGGCTTTAGGGTCGGGGTTATACATTCATACAACCAAGCTGTTTTGGAAGCTGCCAAAAAAATGAGTAGATTTTCATCCATATCTGCTCCAACACAGAGGTTAGTCACTTCAATGCTCTCCGATAAACGATTCATCCAGGAATACATTGAGACCAACCGGAATAGAATAAGACGCGTGCACGACGAGTTTGTGGATTGTTTAAATAAACTAGGAATCAAGTGTGCTAAGAGCAGCGCCGGTATGTTCTGTTGGGCCGATATGAGTGGATTAATCAAACCTTATAGTGAGAAAGGAGAACATGAATTATGGGAGAAGTTTATCAATGTTGCAAAGATCAATATAACTCCTGGATCGGCTTGCCATTGCATAGAACCAGGATGGTTTCGTATATGTTTTACAACTATTTCGTTCGAGGAAATTCCTCTAGTTATTGAACGGATTAGAAAAGTTGTTGAAAGTTGTAAATCTTCAAGTTGA 1620 0.4198 MTLTRNQPTNPIPHTRNPKTQSQSSSSSSSSRSGMKLIVPLQGVVQGRSGFLLGISIPCALFYFLQLYLKRRRPNPNPSSPSSSSSPTLLLPRSSSRSNLSSRGSISRVRLSKLASILSKPDDSLYYLGLERVSQDPYDVFVNPNGIIQLGLSDNKLCFDLIEKWLVKNLEGSMMGTGDISLSINGIVPYQPHHGLNELKIALADFMRQVMGGSVEFDPLNMVLTSGATPAIEILSFCLADQGNAFLVPTPYYPGFDRDVRWRPGIDLIPVHCRSTDNFNLNIAALEQAFSQARKRGVKVRGILISNPSNPVGNILTRDMLFSLLDFAEDKNIHIIADEVFAGSTYGSEEFVSIAEVLDSEYIDKSRVHIIYSLSKDLSIAGFRVGVIHSYNQAVLEAAKKMSRFSSISAPTQRLVTSMLSDKRFIQEYIETNRNRIRRVHDEFVDCLNKLGIKCAKSSAGMFCWADMSGLIKPYSEKGEHELWEKFINVAKINITPGSACHCIEPGWFRICFTTISFEEIPLVIERIRKVVESCKSSS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 321 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 333 356 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 399 422 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 184 200 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 221 241 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 150 176 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 243 264 - -
Vivi2g05639 539 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 367 391 - -
Vivi2g05639 539 Gene3D - 170 422 IPR015421 GO:0003824
Vivi2g05639 539 MobiDBLite consensus disorder prediction 74 102 - -
Vivi2g05639 539 CDD AAT_like 190 530 - -
Vivi2g05639 539 Pfam Aminotransferase class I and II 148 528 IPR004839 GO:0009058|GO:0030170
Vivi2g05639 539 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 373 386 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vivi2g05639 539 MobiDBLite consensus disorder prediction 1 34 - -
Vivi2g05639 539 SUPERFAMILY PLP-dependent transferases 117 533 IPR015424 -
Vivi2g05639 539 Gene3D Aspartate Aminotransferase, domain 1 136 527 IPR015422 GO:0003824
Vivi2g05639 539 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 109 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05639 Vivi-Chr2 184316311 184320288 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05639 K14270 - gmx:100811906 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05639 2 184316311 184320288 Vivi2g05639 2 184316311 184320288 ECH