Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05530 ATGATGAGGATGAGGAATAATCATAATCATAGTAATAAGACAAATGGTGTTTCTTCACCTATAACCTCAGGTGGTTGCAGAGCTGAACCCGGTTCAATGGAATGGGAGATGAGGCCAGGTGGAATGTTGGTTCAAACTAGAACCACTAACTCGGATCAAAACCCGGTTTTGGTTCCTACTATTAGAGTAAGGGTCAAGTTTGGTTCAATTTATCATGAACTCAATATTAGCTCACAAGCCACATTTGGGGATTTGAAGAAAATGTTGTCAGGGCCAACTGGATTACATCATCAAGATCAAAAGTTGTTTTACAAAGATAAAGAAAGAGATTCAAAGGCTTTTCTTGATATAGTTGGTGTAAAGGACAAATCGAAGCTAGTGCTAGTGGAAGATCCTATAAGTCAAGAGAAAAGGATTTTGGAGATAAGAAAGAATGCTAAGATGGAGAAAGCTGCAAAATCTATCTCACAAATCAGCTTGGAGGTCGATAGACTTGCCGGACGGGTATCTGCTTTTGAATCAATAATTAGCAAAGGTGGGAAAGTTGTAGAATCAGATGTGATTGGTCTTATTGAGCTATTGATGAATCAATTGCTTAAATTGGATACCATAATTGCTGATGGAGATGTCAAATTGCAAAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACATTGGACATGCTAAAAGTCAAGAATTCTACAACAAATGGCAATGATGTCCATACAACAACTCAACCTCAACAAAAGCATCCAAATGGAAAAAGATTGGAAACAATTCAAGAGCAACAACAACAAGAACAACCTAGAAAAACCTCAAATGAGGTTTCACTAGAACAACAACAACCACCTCCTTCAGGAGTTGTAGTTACTACACAATGGGAGACATTTGAATTTGATTCTACCCCACCATTAATCACATTTCCATCTACATCCACAACTACTCCTTCAATGAACAATAATAATTCAGGTCCTCCTAAGTTCAATTGGGAATTCTTTGAGTGA 1011 0.3729 MMRMRNNHNHSNKTNGVSSPITSGGCRAEPGSMEWEMRPGGMLVQTRTTNSDQNPVLVPTIRVRVKFGSIYHELNISSQATFGDLKKMLSGPTGLHHQDQKLFYKDKERDSKAFLDIVGVKDKSKLVLVEDPISQEKRILEIRKNAKMEKAAKSISQISLEVDRLAGRVSAFESIISKGGKVVESDVIGLIELLMNQLLKLDTIIADGDVKLQRKMQVKRVQKYVETLDMLKVKNSTTNGNDVHTTTQPQQKHPNGKRLETIQEQQQQEQPRKTSNEVSLEQQQPPPSGVVVTTQWETFEFDSTPPLITFPSTSTTTPSMNNNNSGPPKFNWEFFE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05530 336 ProSiteProfiles Ubiquitin domain profile. 59 129 IPR000626 GO:0005515
Vivi2g05530 336 PANTHER BCL2-ASSOCIATED ATHANOGENE 19 300 IPR039773 GO:0051087
Vivi2g05530 336 MobiDBLite consensus disorder prediction 235 289 - -
Vivi2g05530 336 SUPERFAMILY BAG domain 114 236 IPR036533 GO:0051087
Vivi2g05530 336 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vivi2g05530 336 MobiDBLite consensus disorder prediction 1 27 - -
Vivi2g05530 336 MobiDBLite consensus disorder prediction 7 22 - -
Vivi2g05530 336 Gene3D - 60 130 - -
Vivi2g05530 336 Pfam BAG domain 155 230 IPR003103 GO:0051087
Vivi2g05530 336 FunFam BAG family molecular chaperone regulator 1 59 130 - -
Vivi2g05530 336 ProSiteProfiles BAG domain profile. 154 232 IPR003103 GO:0051087
Vivi2g05530 336 CDD Ubl_AtBAG1_like 60 129 - -
Vivi2g05530 336 SUPERFAMILY Ubiquitin-like 50 135 IPR029071 -
Vivi2g05530 336 Gene3D BAG domain 131 236 IPR036533 GO:0051087
Vivi2g05530 336 SMART BAG_1 154 232 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05530 Vivi-Chr2 181062755 181065633 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05530 - - gmx:100819022 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05530 2 181062755 181065633 Vivi2g05530 2 181062755 181065633 ECH