Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05483 ATGAGAATCTTCATTTTTCGCATCTCCAATTTCGTAAACCGAAATCTCAAAAATTCACCATGGATTCATCACCGCCAACACAACCCCATCAGAGAAATGTCACAATCCACCTCAATCCCCAAAAAACAACTACGAATTCGCGACCATGGCTACGACAATTACATGGAAATCGAGAAGAAAACCCGAAAAGTCCTCAAATTTCAGAGCCTCATCCTCTCTGAACCCAATCAGTCAATCCCAATCCCTCGTCTTGAAACCCTAGCTCATCGTATTGGCTTCACGCGCCACGAAGCCAGCGCGTTTATTCTTAAATTCCCGCATGTGTTTGAAATCTTCGAGCACCCGGTTCAGCGTATCCTCTTCTGCAGGTTGACCCGGAAGGCCATTCTTCAGATTGAACAGGAGCAGCTTGCCCTTGCAGAGCAAGTTTCGCAAGCGGTCATGCGCCTCCGGAAGCTTCTTATGATGTCGAATGGGCTTCGATTACGCCTGGAGCATGTGAGGATTGCGCGGTCGGCCTTTGGGCTACCGGGTGATTTTGAGTACTCGGTTGTTTTGAGGTATCCTGAATTTTTTCGGTTAATTGATGCTAAGGAAACTAGGAATAAGTATATTGAGCTTGTTGAATTTGACCCTAAGTTAGGAATATGTGCAATTGAAGATGCTAGGGAGAGAGTTTATAGAGAGAGAGGTAGTGATGCTGAAGATATTAGGTTTTCTTTTTTGATTGATTTTCCACCTGGTTTTAAGATAAGCAAGTATTTTAGGATTGCGATGTGGAAGTGGCAAAGGTTACCTTATTGGTCGCCTTATGAGGATGTTTCTGGGTATGATTTGAGGTCGATTGAGGCGCAGAAGAGAATGGAGAAAAGGGCTGTTGCCACCATTCATGAATTGTTATCCATGACTGTGGAGAAAAAGATTACTTTGGAGAGGATTGCGCATTTTCGGATGGCAATGCACTTGCCGAAAAAGTTGAAGGAATTTTTGCTTCAGCATCAGGGGATTTTCTACATCTCCACCAGAGGAAATCACGGGAAGCTTCACACTGTTTTTCTTAGGGAGGCTTATAGGAAAGGTGAGTTGGTTGAGCCTAATGATTTGTATTTGGCGCGGAGGAAGCTTGCTGAGCTTGTGATTTTGAGCCCTCGGAAAGCTAGAGTTGATAGGGAATTGGTTGGGTACAGGAGGAGCAAGTTAGATGATGAAATGGGGCAAGTAACAAGAGCATATGTTGAGGATGCCTGTGAAGACTTTAGGGGTGGAGATGGTGTAGGACATAGTGAGGATGCAGAAGATGATTTGTCATCAGATATTGGTTCTGAGGTTGATTCCGGAGATGAGGATGATGATTTTGATGGTAGTGTATCAATTCAAAGGAACTCACCTAAGTGA 1395 0.4416 MRIFIFRISNFVNRNLKNSPWIHHRQHNPIREMSQSTSIPKKQLRIRDHGYDNYMEIEKKTRKVLKFQSLILSEPNQSIPIPRLETLAHRIGFTRHEASAFILKFPHVFEIFEHPVQRILFCRLTRKAILQIEQEQLALAEQVSQAVMRLRKLLMMSNGLRLRLEHVRIARSAFGLPGDFEYSVVLRYPEFFRLIDAKETRNKYIELVEFDPKLGICAIEDARERVYRERGSDAEDIRFSFLIDFPPGFKISKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSMTVEKKITLERIAHFRMAMHLPKKLKEFLLQHQGIFYISTRGNHGKLHTVFLREAYRKGELVEPNDLYLARRKLAELVILSPRKARVDRELVGYRRSKLDDEMGQVTRAYVEDACEDFRGGDGVGHSEDAEDDLSSDIGSEVDSGDEDDDFDGSVSIQRNSPK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05483 464 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 31 401 IPR045040 GO:0003723
Vivi2g05483 464 Pfam Plant organelle RNA recognition domain 47 382 IPR021099 GO:0003723
Vivi2g05483 464 MobiDBLite consensus disorder prediction 435 452 - -
Vivi2g05483 464 MobiDBLite consensus disorder prediction 421 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05483 Vivi-Chr2 180459839 180462245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05483 - - gmx:100782167 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05483 2 180459839 180462245 Vivi2g05483 2 180459839 180462245 ECH