Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05455 ATGTCTAATATGGTTGAGGTTAGAGTTCCAAATCTTGATTGTGAAGGATGTGCTTCAAAACTAAAGAAAGCTCTCTTCAAACTCAAAGGAGTAGATGATGTGGAAGTTGAAATGGAGGCACAAAAGGTAACAGTGAGAGGATATGGTTTAGAAGAGAAAAAAGTATTGAAAGCAATAAAGCGTACTGGAAAAACAGCAGAGCCGTGGCCATTTCTTCCAGGACATGCACATTTTGCTTCATTTTACAAGTATCCAAGTTACATTGTTAATCATTATTACAATGATGCATACAAGAGTGAAGCAAGTAATGGAGTTCATACTTTTTTTCATACCCCTTCTGTTTATTCAGTTGCTCTTGGTTCTGATGAGGTTTTTGCTTCAATGTTTAGTGATGATAACCCTCATGCTTGTACTATAATGTAA 423 0.3593 MSNMVEVRVPNLDCEGCASKLKKALFKLKGVDDVEVEMEAQKVTVRGYGLEEKKVLKAIKRTGKTAEPWPFLPGHAHFASFYKYPSYIVNHYYNDAYKSEASNGVHTFFHTPSVYSVALGSDEVFASMFSDDNPHACTIM 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05455 140 CDD HMA 6 67 IPR006121 GO:0046872
Vivi2g05455 140 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Vivi2g05455 140 Gene3D - 2 67 - -
Vivi2g05455 140 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 137 IPR045181 GO:0046872
Vivi2g05455 140 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
Vivi2g05455 140 SUPERFAMILY HMA, heavy metal-associated domain 4 70 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05455 Vivi-Chr2 179757426 179758374 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05455 - - gmx:100802676 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05455 2 179757426 179758374 Vivi2g05455 2 179757426 179758374 ECH