Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05453 ATGAAATCGTTGTTGAGATCCGCCGTGATATTGATTTTGCCGGTGGTGTTAATCGTCGGCGCGTTGGTGTTCACGCGGTTCATCGAAACACCTGACATTTTCTCCACTGTTTCATCAACCGAACCAGTTCTAATCAGCAAAGCATACGAAATACCAACAAAGCCCCTCAATCCAACAGAGATCCCACTAGATTGCAATGGATACAACCTCACCAAAAAATGTCCCACTAACAATCCCGAAATCTCATTCACCAATCAAGACCGTTTATCTCACTCCACGTGTCCCGATTACTTCCGTTGGATCCACGAAGATTTAAGGCCATGGGCCCACACAGGAATAACAAAGGAAATGGTAGAGAAAGCAAAAGCAACAGCAAATTTCAAATTAGTGATATTGAAAGGAAAAGTGTACTTAGAAATATATGAGAAAGCTTTTCAAACAAGAGATATTTTTACTATATGGGGTATCCTACAGTTGTTAAGGAGGTACCCTGGAATGTTACCTGATTTGGAGCTTATGTTTGATTGTGTTGATTGGCCAGTTGTTTTAATTGATCAAAAAAATGTTGTTGCACCACCTCCACTCTTTCGATATTGCGGTAACGATGCAACGATGGATATCGTCTTTCCTGATTGGTCCTTTTGGGGATGGGCTGAGGTTAATGTAAAGCCATGGGAGATTTTATTGGAAGAGTTGAAAGAGGGTAACAAGAGGATTTCATGGAATGAGAGAGAACCTTATGCTTATTGGAAAGGTAATCCAACTGTTGCGGAAACAAGACAAGATCTCATGAAATGTAATGTTTCTGACAAAAAAGATTGGGGTGCTCGTTTATATACTCAGGACTGGGGACGAGAGTCGCAAGAAGGGTACAAGAAATCAGACTTGGCTAGTCAATGCACTCATAGATATAAGGTGTACATTGAAGGCTCAGCTTGGTCAGTGAGTGAAAAATACATTCTAGCATGTGATTCTCCCACTTTACTTGTGAATCCTCATTATTATGATTTCTTCACAAGAGGGTTAATTCCAATGCATCACTATTGGCCCATTAAGGAAGATAATAAATGCAAATCCATTAAATTTGCCGTGGATTGGGGCAATGGTCACACTGAAAAGGCACAAAGTATTGGAAAAGCAGCAAGTGATTTCATTCAACAAGAGTTAAAGATGGATTATGTATATGACTATATGTTTCATCTCTTAAATTCCTATGCTAAGCTCTTTAAATACCAACCCTCCATAAGTGATAAAGCTGTTGAACTATGTGTGGAATCAATGGTGTGTAACGCACAAGGATTAGAGAAGAAATTTATGATGGATTCATTGGTCAAGGGCCCTTCAAACACCGACCCATGCACTATGCCTCCCCCGTATGCTCCTCCATCTTTGCAAGCCGAAATCAGAAGAAGACAAAGGGTAATTCAACGAATTGAATCCACGGAGAAGAGTTATTGGAGGATACAAAATGTGAAATCGTAA 1482 0.4008 MKSLLRSAVILILPVVLIVGALVFTRFIETPDIFSTVSSTEPVLISKAYEIPTKPLNPTEIPLDCNGYNLTKKCPTNNPEISFTNQDRLSHSTCPDYFRWIHEDLRPWAHTGITKEMVEKAKATANFKLVILKGKVYLEIYEKAFQTRDIFTIWGILQLLRRYPGMLPDLELMFDCVDWPVVLIDQKNVVAPPPLFRYCGNDATMDIVFPDWSFWGWAEVNVKPWEILLEELKEGNKRISWNEREPYAYWKGNPTVAETRQDLMKCNVSDKKDWGARLYTQDWGRESQEGYKKSDLASQCTHRYKVYIEGSAWSVSEKYILACDSPTLLVNPHYYDFFTRGLIPMHHYWPIKEDNKCKSIKFAVDWGNGHTEKAQSIGKAASDFIQQELKMDYVYDYMFHLLNSYAKLFKYQPSISDKAVELCVESMVCNAQGLEKKFMMDSLVKGPSNTDPCTMPPPYAPPSLQAEIRRRQRVIQRIESTEKSYWRIQNVKS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05453 493 Pfam Glycosyl transferase family 90 91 481 IPR006598 -
Vivi2g05453 493 SMART cap10 166 412 IPR006598 -
Vivi2g05453 493 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 71 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05453 Vivi-Chr2 179710594 179715631 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05453 - - gmx:100800365 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05453 2 179710594 179715631 Vivi2g05453 2 179710594 179715631 ECH