Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05372 ATGTACATACACGCCTCAGCCAAGTTCTTGAACTCAATTTTTCATAACACAATGCATGAATATGAATACCCTTGTTGTGAATCTAAATTCTGGTTATTTCTAATTACATGTCTAGTGATTGTGTCATTGGCAGGCATTACATCAGGCCTAGCATTAGGAATATTGTCATACAGTCCGGTCGATCTCGAGGTTCTCATTAAAGCAGGCAGACCAAAAGACAAAAAACATGCAGAAAGGATTCAACCTTTTGTTAAAAATGGACATTTTGTCTTGTGTACTCTTCTTCTTGGAAAATCATTGGCTATGGAGGCACTGCCAATTTTTATGGACATGATAATTCCATCATGGTTCACTATTCTCATGTCAGCACCTTTGGTGACTGTGTTTGCAGAGATTTTGCCTCAAGCTGTTTGCGCTAGATATGGACTTACTTTTGGAGCTAAATTGGCTCCCTTTACTCATTTTCTTCTGCTCATCTTCTTTCCAATAACTTATCCAGCAAGTAAGGTACTTGATTGGGCTCTAGGGAAAGAACATTCAGTTCTTCTAAGAAGATCAGAGTTGAAGACATTTGTCGACTTACATGCAGATCAGGCCGGAAAAGGTGGAGAATTATCTCATCATGAAACTTCTATAATCGCAGGTGCTATGGATTTGACTCAGAAGACAGCTATAGATGCAATGACACACATATCTGAAATTTTTTCTCTTGACATAAATTCCAAACTAGACATGCATACAATGACACAGATAATGAGTAAAGGTCACAGTAGAGTTCCTATACATTCTGGCAACCCAAGAAATATTATTGGTCTCATCTTGGTTAAGAATTTAATCTTTTGCCGCCCAGAAGACGAGAGTCCAATCAAGAATTTGATTATCAGGAAAATTCCTAGGGTATATGAAAGTTGGCCATTATATGAGATATTGAATCAATTCAAGAAGGGTCATAGCCATATGGCCGTTGTGTTGAAGGGAAACATGGAGACAGAAAGCAATGAAGCGGCTCATGCTGTGGATTCACCTATATTTTTGAATATAATAACTAATAAAGAATCAAACCATGCTCAAATTAATGGAGGTAACATCTTCCACAATATAGCTAGCCAAATATATATGAATCAAATTCTTCATATGTACTAG 1143 0.3718 MYIHASAKFLNSIFHNTMHEYEYPCCESKFWLFLITCLVIVSLAGITSGLALGILSYSPVDLEVLIKAGRPKDKKHAERIQPFVKNGHFVLCTLLLGKSLAMEALPIFMDMIIPSWFTILMSAPLVTVFAEILPQAVCARYGLTFGAKLAPFTHFLLLIFFPITYPASKVLDWALGKEHSVLLRRSELKTFVDLHADQAGKGGELSHHETSIIAGAMDLTQKTAIDAMTHISEIFSLDINSKLDMHTMTQIMSKGHSRVPIHSGNPRNIIGLILVKNLIFCRPEDESPIKNLIIRKIPRVYESWPLYEILNQFKKGHSHMAVVLKGNMETESNEAAHAVDSPIFLNIITNKESNHAQINGGNIFHNIASQIYMNQILHMY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05372 380 ProSiteProfiles CNNM transmembrane domain profile. 26 209 IPR002550 -
Vivi2g05372 380 SUPERFAMILY CBS-domain pair 212 326 IPR046342 -
Vivi2g05372 380 FunFam DUF21 domain-containing protein 207 341 - -
Vivi2g05372 380 Pfam Cyclin M transmembrane N-terminal domain 35 205 IPR002550 -
Vivi2g05372 380 Gene3D - 209 349 IPR046342 -
Vivi2g05372 380 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Vivi2g05372 380 PANTHER METAL TRANSPORTER CNNM 18 350 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05372 Vivi-Chr2 178610476 178613761 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05372 K16302 - gmx:100791387 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05372 2 178610476 178613761 Vivi2g05372 2 178610476 178613761 ECH