Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05345 ATGGCGGATGTGACACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAGCCAACAACACCATTCTTCAGATCAATAAGATCTTTAAGGATGGTATTGGTCTTGGTGGCATTTTTCATAGTGCTGTTCAGGTTTATGGAGAGGATGAATGGTCATTTGGATACTGTGAGCAAGGTACTGGGGTTTTTAGCTGCCCTTCTGGACAGAACCCAATGTACACATATCGTGAATCCATTGTTCTAGGGAAAACAAACCTTTCCATTTTCAAGGTAAATCAAATATTGAGAGAGCTCAGTAGAGAGTGGCCTGGAAGTGCATATGATCTGTTGGCCAAAAACTGCAACCACTTCTGTGATGAATTCTGTGAAAGGCTTGATGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCTAATGCTGGTGATACTGCCATGGAAGTTGCAGAGAATACGGCATTACGGTTCCGGCAAGCGAAAACAGAGATTGTATCAGCGAGCAAAGTAGCATACAGGTTCCTCCTAGGCGTTACAAATAACGTTACTAACAATGTTACAAACAACATTAAAACAGGTCCTGATTCCCCCAACAGTTCCAACAGCGGAGTGTCTTCCCCAAGATTTCAAGCTTCTTGGTTGAAAAATATAATTACCAATGGTGCAAAACCATCCACTAGTTCAGAAGCTGAGAATCACAATGGAGTTGCTCCATTACACCCAACGAGAGAGGATGACAAGGCTCTGCTACGTAATTCATCTTCTCGTAGTTCATCGTCTCGTATTGATAGTTGA 792 0.423 MADVTLHIYDVTNSGSEKANNTILQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGYCEQGTGVFSCPSGQNPMYTYRESIVLGKTNLSIFKVNQILRELSREWPGSAYDLLAKNCNHFCDEFCERLDVPKLPGWVNRFANAGDTAMEVAENTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVTNNIKTGPDSPNSSNSGVSSPRFQASWLKNIITNGAKPSTSSEAENHNGVAPLHPTREDDKALLRNSSSRSSSSRIDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05345 263 Pfam PPPDE putative peptidase domain 3 148 IPR008580 GO:0008233
Vivi2g05345 263 Gene3D PPPDE domains 1 169 IPR042266 -
Vivi2g05345 263 PANTHER DESUMOYLATING ISOPEPTIDASE 3 224 IPR008580 GO:0008233
Vivi2g05345 263 MobiDBLite consensus disorder prediction 186 205 - -
Vivi2g05345 263 SMART DUF862_2a 2 155 IPR008580 GO:0008233
Vivi2g05345 263 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Vivi2g05345 263 MobiDBLite consensus disorder prediction 220 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05345 Vivi-Chr2 178062851 178068013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05345 - - tpra:123906151 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05345 2 178062851 178068013 Vivi2g05345 2 178062851 178068013 ECH