Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05079 ATGGCAGATTCAAGCTTAGAAGGAGCCAAAAAGAAAGAAGTGATTCGAATTGAACGTGAATCTGTCATTCCAATTTTGAAACCTAGGCTCTTCATCTCATTGGCTAATCTTATAAAGCGTAGTGCCGATCGAGACGAGTTTTTGAAGCTTTGCAAAAAAATTGAATATACAATTAGAGCTTGGTATCTTCTACAATTTGAGGATATGATGCAACTGCATTCACTCTTTGATCCTGTCTCTGGTGCCCAAAAATTGGAACAACAAGGCTTAACTTCTAAAGAAATTGATGTACTTGAACAAAATTTCTTGAACTTTCTTTTTGAGGTAATGAAAAAGAGCAACTTCAAGATTGCAACAGATGATGAAATTAATGTTGCACTTTCTGGACAATATCTTCTAAATCTTCCAATCACTGTTAATGAATCTAAGCTTGACAATAAGCTTTTGAAAAAATATTTTGAAGCACATCCCTATAATAACCTTCCAGATTTTCATGAAAAGTATATAATCTTTCGGCGCGGAATTGGAGTTGATCAAACAACTGATTACTTTATAATGGAGAAAGTCGACATGCTCATTGCACGATTCTGGGCGTTTCTACTGAGAACACTCAGGTTGGAAAAATTAGTAGCGAAAAGATCGAAAAGACATGGTAAGAAACTAGATCCAAAGAAGGACGATGAAATAAACTCGTCATCAAAACAAGCTTATCAAGATGATGTATATGAACGGATACGCCTTGAAAATATGCCATTGAGTTCTGGTAGTTTGCTAAGCAAGACAACAATCCAAGAACCTACATTTGATAGGATCATTGTTGTTTACAGGCAAGCCAGTTCAAATTCAAAACCAGACCGAGGAATTTTCGTGAAGCACTTCAGAAACATCCCAATGGCAGATATGGAGATAGTTCTTCCAGAAAAGAAAAATCCTGGACTGACTCCTATGGATTGGGTGAAGTTTCTTGGATCTGCTATAGTTGGGTTGGTAGCTGTAGTTAGTTCACTTCAAGCAGCTACAGCCGATTTGAGGGTTATCGGGGCTGTTCTTTCTACCATTGTCGGTTATTGTGTTAAAACATACTTCACGTTTCAACAAAATTTGGCCACATATCAAGATATGATTACGCAGTCGATGTATGAAAAACAACTTGACAGTGGAAGAGGAACACTTCTCCACTTATGTGATGATGTCATTCAACAAGAAGTGAAAGAGGTAGTAATTTCATTCTTTTTTCTGATGGAACAAGGAAAAGCTACAAGACAGGAACTGGATCAAGGGTGTGAAGAACTTATCAGAGAAGAATTCAATGAGAGTTGCAATTTTGATGTAGATGACGCGGTTCATAAACTTGAGAAGCTAGGAATCGTTACTCGGGATCCTATAGGACGATATCAATGTGTTGGATTGAAGAGGGCTAGCGAGATAATCGGTACGACCACGGAAGAGATTGTAATTAAGGCAAAACAAGGAAACATCACTCCTTGA 1488 0.3757 MADSSLEGAKKKEVIRIERESVIPILKPRLFISLANLIKRSADRDEFLKLCKKIEYTIRAWYLLQFEDMMQLHSLFDPVSGAQKLEQQGLTSKEIDVLEQNFLNFLFEVMKKSNFKIATDDEINVALSGQYLLNLPITVNESKLDNKLLKKYFEAHPYNNLPDFHEKYIIFRRGIGVDQTTDYFIMEKVDMLIARFWAFLLRTLRLEKLVAKRSKRHGKKLDPKKDDEINSSSKQAYQDDVYERIRLENMPLSSGSLLSKTTIQEPTFDRIIVVYRQASSNSKPDRGIFVKHFRNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLQAATADLRVIGAVLSTIVGYCVKTYFTFQQNLATYQDMITQSMYEKQLDSGRGTLLHLCDDVIQQEVKEVVISFFFLMEQGKATRQELDQGCEELIREEFNESCNFDVDDAVHKLEKLGIVTRDPIGRYQCVGLKRASEIIGTTTEEIVIKAKQGNITP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05079 495 PANTHER AMINOPEPTIDASE (DUF3754) 9 491 - -
Vivi2g05079 495 Pfam Protein of unknown function (DUF3754) 268 389 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05079 Vivi-Chr2 172525501 172529548 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05079 - - mtr:25495897 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03306 6 124001552 124006365 Vivi2g05079 2 172525501 172529548 PCT