Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04604 ATGGATAGTTCAGAGAAGGTTGTTGCTGTGATTATGGTGGGTGGACCCACCAAAGGAACTAGATTTCGACCTCTTTCTTTCAATACTCCAAAACCCCTTTTCCCTTTGGCTGGACAGCCAATGGTTCATCATCCTATTTCTGCTTGTAAAAGGATACCCAATTTAGCTCAAATATATCTTATTGGATTCCATGAGGAGCGAGAATTCGCTCTATACGTCTCTTCAATTTCAAACGAGCTGAAATTGCCAGTAAGATATTTGAAGGAGGATAAACCACATGGCTCAGCAGGTGGCCTTTACTACTTCAGAGATATAATCATGGAAGACAGTCCATCGCATATCTTTCTGCTAAATTGTGATGTTTGCTGCAGTTTTCCATTACCATCCATGCTTGATGCTCATATTAAGTACGGTGGGATGGGGACAATGTTAGTAATAAAGGTTTCAGCTGAATCTGCTAACCAGTTTGGCGAGTTGGTTGCTGATCCAGACACTCATGAATTGCTGCATTATACTGAGAAACCCGAGACATTTGTTAGTGATTTGATAAATTGCGGTGTATACATTTTCACACCTGATATTTTTAATGCCATCGAGGATGTATCTACGAACCGAGAAGGACGAGCTAATCTACGACGTCTTTCCAGCTTTGAAGCTCTCCAATCTGCGACCAGGACTCTTCCTAAAGATTTTGTAAGACTGGATCAAGATATACTATCACCTCTAGCTGGAAAGAAGAAGTTGTATACATATGAGACAAATGATTTCTGGGAGCAAATTAAAACTCCGGGCCTGTCTTTGAAATGCTCGGAGTTGTATCTTGCTCAATTTCGATATACTTCCCCGCATCTTTTGGCCAGCGGAGATGGTGAAAAGAATGCTAAAATTGTTGGTGATGTATATATTCATCCGTCTGCCAAAGTTCATCCATCTGCAAAGATTGGTCCAAATGTTTCTATCTCAGCAAATGTTCGTGTTGGTGCTGGTGTCAGGTTAATCGGTTGTATAGTATTGGACGATGTTGAAATTAAGGAAAATGCTGTAGTCATAAATTCTATTGTTGGATGGAAGTCGTCGCTCGGAAGATGGTCACGTGTACAGGCTGATGGTGATTACAATGCAAAGCTTGGCATAACCATCCTAGGTGAAGCTGTGACAGTGGAAGATGAAGTAGTGGTGGTCAACAGCATTGTTCTTCCTCACAAGATTCTTAATGTCAGTGTGCAAGATGAAATCATCTTATAA 1245 0.4096 MDSSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPDTHELLHYTEKPETFVSDLINCGVYIFTPDIFNAIEDVSTNREGRANLRRLSSFEALQSATRTLPKDFVRLDQDILSPLAGKKKLYTYETNDFWEQIKTPGLSLKCSELYLAQFRYTSPHLLASGDGEKNAKIVGDVYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLIGCIVLDDVEIKENAVVINSIVGWKSSLGRWSRVQADGDYNAKLGITILGEAVTVEDEVVVVNSIVLPHKILNVSVQDEIIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04604 414 Pfam Nucleotidyl transferase 9 208 IPR005835 GO:0009058
Vivi2g04604 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 414 - -
Vivi2g04604 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 276 IPR029044 -
Vivi2g04604 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
Vivi2g04604 414 Gene3D Hexapeptide repeat proteins 286 413 - -
Vivi2g04604 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Vivi2g04604 414 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Vivi2g04604 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04604 Vivi-Chr2 162329652 162333658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04604 K00966 - fve:101314646 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04604 2 162329652 162333658 Vivi2g04604 2 162329652 162333658 ECH