LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g04474	ATGGGTATGGTTGAAACTGAATCCAAGGAACCATGTGGGGTTTCAAGTAGTGTAGCTGAGAATGTCATTGTTGAAGTTGATGGTTCAGAGAAGGTGGAGGATGAGGTTAAGGGGGGTCTTGGAAGTTTGAAAAGTGGGAAGGAGAATGGTGCTGGAGAGAAAGGTTTGAGTGATGATGGTGTTGTAGTTGTTGAAGTTGTTAAGAGTAGTGTTTTCGAGACTGAGGTTTCGGTTTTGAAGGAAAATGATTCTCAGGTTGTGGCTGATTCTGAGATGAATAATGGGGTGTCTTCTGTGTTGAAAACGGGAGAAAGCGATGGAGGTGTTGTTGATGAGAAGTTTGATTCAGAGGGAAAAGACGAAGAGGGGAAAAAAGATGAAGGTTTTGATGAGAAAATTGAGACTATTGAGGTTCCGATTGTGGCGATAAGTGAGAACATTAATTCTGAGGAAGGGAAAAAAGATGGAAATTCTGACGACATTGTGAATTTTGAGGTACCGATAGTTGAGACGAATGAGAACATTGATGTTGGAATCGATGATTTGGTTGATGAAAAGTATGATTATTCTGTTGGTGATTTTGTTTGGGGTAAAATTAAGAGTCATCCTTGGTGGCCAGGTCGAGTTTATAATCCGTCCGATGCGTCGGATTTTGCTTTGAAGCTGAAACAGAAGAATCGGCTCTTGGTGGCTTACTTTGGCGATGGAACATTTGCTTGGTGCCATCCGTCGCAATTGAAGCCTTTTAAGGAAAATTTTGATGATATGGTGAAACAAAGTAGTACCAAAAGTTTTACCTATGCTGTACAAGAAGCTGTAGATGAGGTGGGAACGGTTCTGGTTAAGAAGATGAGTAGTCTGTTTGTTGCGGCCGGGGAAACTGAGTCTGAATTTGCTCCATTGCTAGCGAATAATGCAGGAATCAAGGAAGGTGTTTTTGTGCCTGAAAGTGGCATAGAGAGACTTTCGGCTGTTGCAATCGAACCGGCTGAGTTACTTTCTCAAGTGAAACAAATTGCTGAAGTTGTTGATATTGCCAGTGTTCTTGAGCTGGAAATATTAAAGGCTCAGCTTTCTGCTTTTTATTTCTCGAGAGGAGGATATAAGTTAGCTTGTTACGAGGATCCCAAACGGGTTATTGGACTTGAAGATAAAGATGATGTAGATAATGCTGTGGAAGCACCGTCCCAAGGGCCATTTGAAGAGGACTTCTCTAACCTGCCGTTGAGCCCAAAATCAGGTGAACTGCGTCCTTCCCCTGGGCTTTCAGGAAGTCGATCGAACCGGAGAAGAAAGCAGAAAAGCATTGCTGACATTATGGGGGAGGATAACGATGCTGATGCAAAAGATAAGGAAGATGACGTAAGTGATGATGAAGTTCTTGATGCAATTAGGTCAAGGGGTAGAAAGAAGAGAAAAGATAGTGATGATGCAGTGACACCTAAACCAGCTCGCAAGAGAAAAGAGTTGATTATCGAAACTGATGGAAAGTTTGAAATGGCCAGAAAAGAAAGCAGTGAGAGCAAGAAGAAAAGTGAGAATGGCAAATCGCGGCGTTTGAAAAAGAAAAAAGAAGAGGCTGTTGACAATGAAGAGATCAGCGATGAGGGGAATGAAAAGGAAAATGATGAAGGGATGTCGGAAGAACAAAGCAAGAAGGGTTTTTTGTCAAGAGAAAGAAAGAAAAGCAAGTACTTGTCGCCTCCTTTCACTACTTCAATCACGCTTATGAGGGGAAAAGTGAAACCAGAAGCTAGGAGTGCTGGCCCGCTTTCTCCTCGACTTTCGAAGTGTAACGGCAAGGCACTTCAAGAGTTGGAGCTTTCTGACAGCTTGAATGACCAAACACAAGAGGATGAGAAAAAGACTATTGATCCAGAGAAAGTTAAGGTTCCTTCGGCTGAAATTCTGTCCAAAATCCGCAATGTAGCTGTTAGTCCACAAATTTCTAGGGAGGGCGCTTCTGCTGCGAAATTGGAAGATTTTATTTATGTCATGAGGAGTTCTTTGTATCGTGAAGGATCGTTACACAAAGCATACAACAAAAGTCGACGTGGAAGGAAGAGAAGTAAGCCGGAATCTGAACTTGATCAATCTGCTCACGTAACGCCGATTGAAGATTCTGAACCAGCTAAGAAAAGAAAGAAGACAGCTACAAGCATTTCAGAAGGGAAGAAGAAGGCTCGTGAAACCGAGACCGGCGGCAAGAAAGAAATTGATGAAAAATCTTTGCCAGCTGTGCTTTTTGTGTCGTTTTGGCCCGGGTCCACCCTACCTACAACGTCTGATCTTGTGGCAGTGTATCAAAAGTTTGGAGCTCTGAATGAAGAAGAAACCAATATGTTCCTTACTAATTATACTGGTCGAGTTTCTTTCCTAAGAACCTGTGATGCTGAAAAGGCATTGAGCGAATCGCAAAAGAAAAACCCGTTTGAACCTTCAGAAGTAACTTTTCAGCTCCAGTATGTTTCCTCTGATGGATCCAAGTCTGGAGCACAACACACTGAAAGATCAAAGAAGTCCAAACCTTCACAGGACAAGAAGGAAGACAAGACTCCGACTCAGAAGAAAGACAAGACTCCGACTAAGAAGAAAGATAAGACTCCGACTCAGAAGAAAGACACGACTCCAACTCCAACCATACAATCTCTGTCAGATGGTAATGAGGCGTCTAAACTGAACTTCATAAAAGAAAAACTTCAAGGTCTGGTCTCAATGCTCGAATCATCTGACGACAAAACACCTGATTTCAAGACAAAGATAGAGAGTGAGGTGAAAGGTCTTCTGGAGGAGGTGAACAAGATGGTTGAATCTACTTCGTCGTGA	2826	0.4253	MGMVETESKEPCGVSSSVAENVIVEVDGSEKVEDEVKGGLGSLKSGKENGAGEKGLSDDGVVVVEVVKSSVFETEVSVLKENDSQVVADSEMNNGVSSVLKTGESDGGVVDEKFDSEGKDEEGKKDEGFDEKIETIEVPIVAISENINSEEGKKDGNSDDIVNFEVPIVETNENIDVGIDDLVDEKYDYSVGDFVWGKIKSHPWWPGRVYNPSDASDFALKLKQKNRLLVAYFGDGTFAWCHPSQLKPFKENFDDMVKQSSTKSFTYAVQEAVDEVGTVLVKKMSSLFVAAGETESEFAPLLANNAGIKEGVFVPESGIERLSAVAIEPAELLSQVKQIAEVVDIASVLELEILKAQLSAFYFSRGGYKLACYEDPKRVIGLEDKDDVDNAVEAPSQGPFEEDFSNLPLSPKSGELRPSPGLSGSRSNRRRKQKSIADIMGEDNDADAKDKEDDVSDDEVLDAIRSRGRKKRKDSDDAVTPKPARKRKELIIETDGKFEMARKESSESKKKSENGKSRRLKKKKEEAVDNEEISDEGNEKENDEGMSEEQSKKGFLSRERKKSKYLSPPFTTSITLMRGKVKPEARSAGPLSPRLSKCNGKALQELELSDSLNDQTQEDEKKTIDPEKVKVPSAEILSKIRNVAVSPQISREGASAAKLEDFIYVMRSSLYREGSLHKAYNKSRRGRKRSKPESELDQSAHVTPIEDSEPAKKRKKTATSISEGKKKARETETGGKKEIDEKSLPAVLFVSFWPGSTLPTTSDLVAVYQKFGALNEEETNMFLTNYTGRVSFLRTCDAEKALSESQKKNPFEPSEVTFQLQYVSSDGSKSGAQHTERSKKSKPSQDKKEDKTPTQKKDKTPTKKKDKTPTQKKDTTPTPTIQSLSDGNEASKLNFIKEKLQGLVSMLESSDDKTPDFKTKIESEVKGLLEEVNKMVESTSS	941

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g04474	941	CDD	PWWP	192	275	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	458	530	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	832	872	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	390	627	-	-
	Vivi2g04474	941	SMART	PWWP_4	189	250	IPR000313	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	688	738	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	544	565	-	-
	Vivi2g04474	941	SUPERFAMILY	Tudor/PWWP/MBT	186	294	-	-
	Vivi2g04474	941	ProSiteProfiles	PWWP domain profile.	191	252	IPR000313	-
	Vivi2g04474	941	PANTHER	PWWP DOMAIN-CONTAINING PROTEIN	6	495	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	99	126	-	-
	Vivi2g04474	941	Pfam	PWWP domain	192	274	IPR000313	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	431	446	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	824	890	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	35	56	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	873	890	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	106	126	-	-
	Vivi2g04474	941	MobiDBLite	consensus disorder prediction	680	738	-	-
	Vivi2g04474	941	Gene3D	-	181	285	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g04474	Vivi-Chr2	159527332	159530772	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g04474	-		-	psat:127119440	1399.42

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi2g04474	2	159527332	159530772	Vivi2g04474	2	159527332	159530772	ECH