Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04329 ATGTCTGTCCGTCTCGCCCTGAGGTCATTCACTCGTCACTGTCATTCCTCCGCCGAAAATTCCAAATGGCTCACACTTCCACCTGTGAATACAACCACCATCAACACTTCCTCCAACCAACTCTCCTCCACTTCAACCACTGCCCTCAAATGGGTCACTCGTTGCTGCCCCCAACTACCCAAAACCCTTGTCCACAAACTTTTCCGCCTAAAACAAGTTCGAATGCTTCCACCACAACAACAACAAGAACAAGATCATAAATTCAAAAAGGTGACACCTAAAGACACCTTGAACCCCGGCGATCGTATATTTCTTCCACATTCTGTCAAACAACAAACGCCTGTACCGTCCAAACGTCCTGACTCTCCCCTCACTCCAACTCTCACCGCCAAACAAATCAATTTTATCCGTGCTCTTGTTATCTATAAGGATCCTGAGATTCTTGTCCTCAACAAACCTCCCGGAATGCCAGTACAGGGTGGCATTAATATCAAATGGAGTTTAGATGCTGTAGCTTCAGAATGTTTAAAGCATGAATGCCCTGAATCCCCTCGTCTGGTGCATAGACTTGACAGAGACTGTTCTGGAATTCTCGTCATGGGAAGAACAAAGACAAGTACTACGGTTCTGCATTCCATCTTCCGCGAGAAAACTTCCATGGCTTCAGATGATATTGGCACGGAAAAGAGAATCTTACAAAGAAAGTATTGGGCACTGGTGCTCGGATGTCCTAGACGTTCACGAGGGATGGTTACTGCTCCACTGGGTAAGGTGGTGGTTGACAACGGAAAATCTGATCGAATAACTATAGTTGACAATTCTACATCGCTGTCACCCCAACATGCAATTACAGAGTACCGGGTGATTGCATCATCATCTCATGGTTATACATGGTTGGAGCTTTCCCCCTTAACAGGTAGAAAACACCAGCTCCGAGTCCACTGTGCTGAGGTGTTAGGTACACCAATAGTTGGGGATTACAAATATGGATGGCAAGCTCATAAGAAGTGGGGACAGTTTGATTTGTCTACTCTGGAGGACTCAACTGAAGAACTTCTGAAGGAAGAGACATTACCTTTTGGCCTTAACTTGAACAAGGGTAGCATCTCTGACAAGCGTCCTCATTTACATCTTCATTGCAAGCAAATAGTCTTGCCTGATATATCTCAAGCACTGCAAAATGTGCAATCACTATCAGGTTTAAGTTATGACCTTTCAGCGGTTAAAGCACTTGAGTTGGAAGCGGATTTGCCTCCATTCATGAAAAAGAGTTGGGATGTGACAAGTTCGTGA 1293 0.4501 MSVRLALRSFTRHCHSSAENSKWLTLPPVNTTTINTSSNQLSSTSTTALKWVTRCCPQLPKTLVHKLFRLKQVRMLPPQQQQEQDHKFKKVTPKDTLNPGDRIFLPHSVKQQTPVPSKRPDSPLTPTLTAKQINFIRALVIYKDPEILVLNKPPGMPVQGGINIKWSLDAVASECLKHECPESPRLVHRLDRDCSGILVMGRTKTSTTVLHSIFREKTSMASDDIGTEKRILQRKYWALVLGCPRRSRGMVTAPLGKVVVDNGKSDRITIVDNSTSLSPQHAITEYRVIASSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGQFDLSTLEDSTEELLKEETLPFGLNLNKGSISDKRPHLHLHCKQIVLPDISQALQNVQSLSGLSYDLSAVKALELEADLPPFMKKSWDVTSS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04329 430 SUPERFAMILY Pseudouridine synthase 136 387 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vivi2g04329 430 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 41 427 - -
Vivi2g04329 430 Pfam RNA pseudouridylate synthase 147 316 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vivi2g04329 430 Gene3D Pseudouridine synthase 131 397 - -
Vivi2g04329 430 CDD PseudoU_synth_RluA_like 147 339 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04329 Vivi-Chr2 157229715 157233382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04329 - - gmx:100779473 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04329 2 157229715 157233382 Vivi2g04329 2 157229715 157233382 ECH